RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 RFX1P22670 979 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 CDK17Q00537 523 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 IRX4P78413 519 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 APBB1IPQ7Z5R6 666 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 PROM2Q8N271 834 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 FOXP3Q9BZS1 431 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 PATL2C9JE40 543 aaKnown RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 ALCAMQ13740 583 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 NBPF10Q6P3W6 841 aaKnown RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 POLA2Q14181 598 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 TBC1D22AQ8WUA7 517 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 GCFC2P16383 781 aaKnown RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 TNNC1P63316 161 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 BIRC3Q13489 604 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 A2MP01023 1474 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 CFAP157Q5JU67 520 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 PCMTD1Q96MG8 357 aaPredicted RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 KIF14Q15058 1648 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 ATP2A2P16615 1042 aaKnown RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 LONP1P36776 959 aaKnown RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 ANO1Q5XXA6 986 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 CRNKL1Q9BZJ0 848 aaKnown RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 NLRP2Q9NX02 1062 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 DONSONQ9NYP3 566 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 MROH5Q6ZUA9 1318 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 NAA25Q14CX7 972 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 SAMD3Q8N6K7 520 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 APPBP2Q92624 585 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 RTL9Q8NET4 1388 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 SLFN14P0C7P3 912 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 PDIA5Q14554 519 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 SIL1Q9H173 461 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 MTRF1LQ9UGC7 380 aaKnown RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 ITGB1BP2Q9UKP3 347 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 ABCB11O95342 1321 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 SAMD9Q5K651 1589 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 HAUS7Q99871 368 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 NLRP12P59046 1061 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 CAV1Q03135 178 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 PFDN4Q9NQP4 134 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 WWC3Q9ULE0 1092 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 SEPT7Q16181 437 aaKnown RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 SPATA1Q5VX52 437 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 ZNF75DP51815 510 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 NOX5Q96PH1 765 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 SUGT1Q9Y2Z0 365 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 NPATQ14207 1427 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 GOLGA8KD6RF30 607 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 BATF3Q9NR55 127 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 CNNM1Q9NRU3 951 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 WDR62O43379 1518 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 WDR66Q8TBY9 1149 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 ATP8A2Q9NTI2 1148 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 AMOTL2Q9Y2J4 779 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 HMOX1P09601 288 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 ZNF444Q8N0Y2 327 aaPredicted RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 LPIN2Q92539 896 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 FAN1Q9Y2M0 1017 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 A2ML1A8K2U0 1454 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 URB2Q14146 1524 aaKnown RBP5.56□□□□□ -1.52
PCDH9-201ENST00000377861 TTC6Q86TZ1 520 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 TCP11Q8WWU5 503 aa5.56□□□□□ -1.52
PCDH9-201ENST00000377861 SETSIPP0DME0 302 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 ZNF790Q6PG37 636 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 SAR1BQ9Y6B6 198 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 SAFB2Q14151 953 aaKnown RBP eCLIP5.55□□□□□ -1.52
PCDH9-201ENST00000377861 FIBPO43427 364 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 CUL1Q13616 776 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 PRPF40BQ6NWY9 871 aaKnown RBP5.55□□□□□ -1.52
PCDH9-201ENST00000377861 TTLL7Q6ZT98 887 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 WHAMMQ8TF30 809 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 CTIFO43310 598 aaKnown RBP5.55□□□□□ -1.52
PCDH9-201ENST00000377861 LDHAL6AQ6ZMR3 332 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 SLFN12Q8IYM2 578 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 LRP2BPQ9P2M1 347 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 CCDC194A0A1B0GVG4 234 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 G3V3G9 751 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 MUTP22033 750 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 DCAF8Q5TAQ9 597 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 SOS2Q07890 1332 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-201ENST00000377861 NR1H3Q13133 447 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 CFAP61Q8NHU2 1237 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 CYP2E1P05181 493 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-201ENST00000377861 NUTM2BA6NNL0 878 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-201ENST00000377861 NUTM2EB1AL46 878 aaPredicted RBP5.55□□□□□ -1.52
PCDH9-201ENST00000377861 ZBTB22O15209 634 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 ESCO1Q5FWF5 840 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 DDX46Q7L014 1031 aaKnown RBP5.55□□□□□ -1.52
PCDH9-201ENST00000377861 FSIP1Q8NA03 581 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 TRIM7Q9C029 511 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 ACEP12821 1306 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 DYTNA2CJ06 578 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 FDX1P10109 184 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 C6orf163Q5TEZ5 329 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 ZNF710Q8N1W2 664 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 OTUD6BQ8N6M0 293 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 APBB2Q92870 758 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 SYNPO2Q9UMS6 1093 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 AOC3Q16853 763 aa5.55□□□□□ -1.52
PCDH9-201ENST00000377861 SH2D4AQ9H788 454 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms