RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 IRF6O14896 467 aa23.91■■□□□ 1.42
CBWD3-204ENST00000377349 ZFYVE28Q9HCC9 887 aa23.91■■□□□ 1.42
CBWD3-204ENST00000377349 DAGLAQ9Y4D2 1042 aa23.91■■□□□ 1.42
CBWD3-204ENST00000377349 BTBD19C9JJ37 291 aa23.9■■□□□ 1.42
CBWD3-204ENST00000377349 PRDX5P30044 214 aa23.9■■□□□ 1.42
CBWD3-204ENST00000377349 DIXDC1Q155Q3 683 aa23.9■■□□□ 1.42
CBWD3-204ENST00000377349 MIER1Q8N108 512 aa23.9■■□□□ 1.42
CBWD3-204ENST00000377349 CIAO1O76071 339 aa23.89■■□□□ 1.41
CBWD3-204ENST00000377349 CT47B1P0C2W7 299 aaPredicted RBP23.89■■□□□ 1.41
CBWD3-204ENST00000377349 CDC42EP5Q6NZY7 148 aa23.89■■□□□ 1.41
CBWD3-204ENST00000377349 SIL1Q9H173 461 aa23.89■■□□□ 1.41
CBWD3-204ENST00000377349 FBXO3Q9UK99 471 aa23.89■■□□□ 1.41
CBWD3-204ENST00000377349 MGAMO43451 1857 aa23.89■■□□□ 1.41
CBWD3-204ENST00000377349 UBTFL1P0CB47 393 aaPredicted RBP23.88■■□□□ 1.41
CBWD3-204ENST00000377349 CETPP11597 493 aa23.88■■□□□ 1.41
CBWD3-204ENST00000377349 INPP5BP32019 993 aa23.88■■□□□ 1.41
CBWD3-204ENST00000377349 NFIAQ12857 509 aa23.88■■□□□ 1.41
CBWD3-204ENST00000377349 PPIL2Q13356 520 aa23.88■■□□□ 1.41
CBWD3-204ENST00000377349 ATP2B3Q16720 1220 aa23.88■■□□□ 1.41
CBWD3-204ENST00000377349 MIGA2Q7L4E1 593 aa23.88■■□□□ 1.41
CBWD3-204ENST00000377349 FAM151AQ8WW52 585 aa23.88■■□□□ 1.41
CBWD3-204ENST00000377349 ZCCHC17Q9NP64 241 aaKnown RBP23.88■■□□□ 1.41
CBWD3-204ENST00000377349 PHIPQ8WWQ0 1821 aa23.88■■□□□ 1.41
CBWD3-204ENST00000377349 TLR2O60603 784 aa23.87■■□□□ 1.41
CBWD3-204ENST00000377349 DCAF15Q66K64 600 aa23.87■■□□□ 1.41
CBWD3-204ENST00000377349 HOOK2Q96ED9 719 aa23.87■■□□□ 1.41
CBWD3-204ENST00000377349 ZNF333Q96JL9 665 aa23.87■■□□□ 1.41
CBWD3-204ENST00000377349 ZNF341Q9BYN7 854 aa23.87■■□□□ 1.41
CBWD3-204ENST00000377349 API5Q9BZZ5 524 aaKnown RBP23.87■■□□□ 1.41
CBWD3-204ENST00000377349 ARHGAP39Q9C0H5 1083 aa23.87■■□□□ 1.41
CBWD3-204ENST00000377349 ZNF112Q9UJU3 913 aa23.87■■□□□ 1.41
CBWD3-204ENST00000377349 PTCH2Q9Y6C5 1203 aa23.87■■□□□ 1.41
CBWD3-204ENST00000377349 HNRNPUQ00839 825 aaKnown RBP eCLIP23.86■■□□□ 1.41
CBWD3-204ENST00000377349 SNAPC2Q13487 334 aa23.86■■□□□ 1.41
CBWD3-204ENST00000377349 PA2G4Q9UQ80 394 aaKnown RBP23.86■■□□□ 1.41
CBWD3-204ENST00000377349 SALL1Q9NSC2 1324 aa23.86■■□□□ 1.41
CBWD3-204ENST00000377349 ZBTB22O15209 634 aa23.85■■□□□ 1.41
CBWD3-204ENST00000377349 EN2P19622 333 aaPredicted RBP23.85■■□□□ 1.41
CBWD3-204ENST00000377349 PHKA1P46020 1223 aa23.85■■□□□ 1.41
CBWD3-204ENST00000377349 PPATQ06203 517 aa23.85■■□□□ 1.41
CBWD3-204ENST00000377349 CEP126Q9P2H0 1117 aa23.85■■□□□ 1.41
CBWD3-204ENST00000377349 FAM198AQ9UFP1 575 aa23.85■■□□□ 1.41
CBWD3-204ENST00000377349 LRRFIP2Q9Y608 721 aaKnown RBP23.85■■□□□ 1.41
CBWD3-204ENST00000377349 RARSP54136 660 aaKnown RBP23.84■■□□□ 1.41
CBWD3-204ENST00000377349 TCP10Q12799 353 aa23.84■■□□□ 1.41
CBWD3-204ENST00000377349 ATRNL1Q5VV63 1379 aa23.84■■□□□ 1.41
CBWD3-204ENST00000377349 RFX7Q2KHR2 1363 aa23.84■■□□□ 1.41
CBWD3-204ENST00000377349 ADORA1P30542 326 aa23.84■■□□□ 1.41
CBWD3-204ENST00000377349 MOGSQ13724 837 aa23.84■■□□□ 1.41
CBWD3-204ENST00000377349 FRAT1Q92837 279 aaPredicted RBP23.84■■□□□ 1.41
CBWD3-204ENST00000377349 DOCK1Q14185 1865 aa23.83■■□□□ 1.41
CBWD3-204ENST00000377349 DOCK3Q8IZD9 2030 aa23.83■■□□□ 1.41
CBWD3-204ENST00000377349 LDHBP07195 334 aaKnown RBP23.83■■□□□ 1.4
CBWD3-204ENST00000377349 IL15P40933 162 aaPredicted RBP23.83■■□□□ 1.4
CBWD3-204ENST00000377349 LACTBP83111 547 aaPredicted RBP23.83■■□□□ 1.4
CBWD3-204ENST00000377349 ZFPM1Q8IX07 1006 aa23.83■■□□□ 1.4
CBWD3-204ENST00000377349 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.83■■□□□ 1.4
CBWD3-204ENST00000377349 MEIS3Q99687 375 aa23.83■■□□□ 1.4
CBWD3-204ENST00000377349 COPRSQ9NQ92 184 aa23.83■■□□□ 1.4
CBWD3-204ENST00000377349 KCNH4Q9UQ05 1017 aa23.83■■□□□ 1.4
CBWD3-204ENST00000377349 ADGRA2Q96PE1 1338 aa23.82■■□□□ 1.4
CBWD3-204ENST00000377349 SEMA3EO15041 775 aa23.82■■□□□ 1.4
CBWD3-204ENST00000377349 NOL9Q5SY16 702 aaKnown RBP23.82■■□□□ 1.4
CBWD3-204ENST00000377349 PCDH10Q9P2E7 1040 aa23.82■■□□□ 1.4
CBWD3-204ENST00000377349 CTGFP29279 349 aa23.81■■□□□ 1.4
CBWD3-204ENST00000377349 ARHGEF6Q15052 776 aa23.81■■□□□ 1.4
CBWD3-204ENST00000377349 SLC9C1Q4G0N8 1177 aa23.81■■□□□ 1.4
CBWD3-204ENST00000377349 C17orf99Q6UX52 265 aa23.81■■□□□ 1.4
CBWD3-204ENST00000377349 USP40Q9NVE5 1235 aa23.81■■□□□ 1.4
CBWD3-204ENST00000377349 GNL3LQ9NVN8 582 aaKnown RBP23.81■■□□□ 1.4
CBWD3-204ENST00000377349 DENND2AQ9ULE3 1009 aa23.81■■□□□ 1.4
CBWD3-204ENST00000377349 CCDC102BQ68D86 513 aa23.8■■□□□ 1.4
CBWD3-204ENST00000377349 GAKO14976 1311 aa23.8■■□□□ 1.4
CBWD3-204ENST00000377349 RASGRF1Q13972 1273 aa23.79■■□□□ 1.4
CBWD3-204ENST00000377349 ANKRD23Q86SG2 305 aa23.79■■□□□ 1.4
CBWD3-204ENST00000377349 PHF20L1A8MW92 1017 aa23.78■■□□□ 1.4
CBWD3-204ENST00000377349 IDI2Q9BXS1 227 aa23.78■■□□□ 1.4
CBWD3-204ENST00000377349 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.78■■□□□ 1.4
CBWD3-204ENST00000377349 WDHD1O75717 1129 aaPredicted RBP23.77■■□□□ 1.4
CBWD3-204ENST00000377349 TIMM10P62072 90 aa23.77■■□□□ 1.4
CBWD3-204ENST00000377349 SH3BP5LQ7L8J4 393 aa23.77■■□□□ 1.4
CBWD3-204ENST00000377349 NBPF11Q86T75 865 aa23.77■■□□□ 1.4
CBWD3-204ENST00000377349 SH3TC2Q8TF17 1288 aa23.77■■□□□ 1.4
CBWD3-204ENST00000377349 CPA4Q9UI42 421 aa23.77■■□□□ 1.4
CBWD3-204ENST00000377349 ATAD5Q96QE3 1844 aa23.77■■□□□ 1.4
CBWD3-204ENST00000377349 TRIOBPQ9H2D6 2365 aa23.77■■□□□ 1.4
CBWD3-204ENST00000377349 PDHXO00330 501 aa23.76■■□□□ 1.39
CBWD3-204ENST00000377349 BCAR3O75815 825 aa23.76■■□□□ 1.39
CBWD3-204ENST00000377349 RGS3P49796 1198 aa23.76■■□□□ 1.39
CBWD3-204ENST00000377349 CLUAP1Q96AJ1 413 aa23.76■■□□□ 1.39
CBWD3-204ENST00000377349 TMEM106CQ9BVX2 250 aa23.76■■□□□ 1.39
CBWD3-204ENST00000377349 PDS5AQ29RF7 1337 aaKnown RBP23.76■■□□□ 1.39
CBWD3-204ENST00000377349 GNRH1P01148 92 aa23.76■■□□□ 1.39
CBWD3-204ENST00000377349 TRIM47Q96LD4 638 aa23.76■■□□□ 1.39
CBWD3-204ENST00000377349 RANBP2P49792 3224 aaKnown RBP23.75■■□□□ 1.39
CBWD3-204ENST00000377349 CDK5RAP2Q96SN8 1893 aa23.75■■□□□ 1.39
CBWD3-204ENST00000377349 MYO5AQ9Y4I1 1855 aaKnown RBP23.75■■□□□ 1.39
CBWD3-204ENST00000377349 IPO8O15397 1037 aaKnown RBP23.75■■□□□ 1.39
CBWD3-204ENST00000377349 SLURP2P0DP57 97 aa23.75■■□□□ 1.39
CBWD3-204ENST00000377349 MAP3K10Q02779 954 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms