RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 GNAT2P19087 354 aa15.5■□□□□ 0.07
CBWD3-203ENST00000377344 RPS12P25398 132 aaKnown RBP15.5■□□□□ 0.07
CBWD3-203ENST00000377344 HDLBPQ00341 1268 aaKnown RBP15.5■□□□□ 0.07
CBWD3-203ENST00000377344 C22orf23Q9BZE7 217 aa15.5■□□□□ 0.07
CBWD3-203ENST00000377344 CRNKL1Q9BZJ0 848 aaKnown RBP15.5■□□□□ 0.07
CBWD3-203ENST00000377344 CFAP100Q494V2 611 aa15.49■□□□□ 0.07
CBWD3-203ENST00000377344 GPC2Q8N158 579 aa15.49■□□□□ 0.07
CBWD3-203ENST00000377344 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
CBWD3-203ENST00000377344 MAP4K1Q92918 833 aa15.49■□□□□ 0.07
CBWD3-203ENST00000377344 DSCC1Q9BVC3 393 aa15.49■□□□□ 0.07
CBWD3-203ENST00000377344 MRIQ9BWK5 157 aa15.49■□□□□ 0.07
CBWD3-203ENST00000377344 PCDHAC2Q9Y5I4 1007 aa15.49■□□□□ 0.07
CBWD3-203ENST00000377344 PLCG2P16885 1265 aa15.48■□□□□ 0.07
CBWD3-203ENST00000377344 MCCP23508 829 aa15.48■□□□□ 0.07
CBWD3-203ENST00000377344 SDR42E1Q8WUS8 393 aa15.48■□□□□ 0.07
CBWD3-203ENST00000377344 ZDHHC15Q96MV8 337 aa15.48■□□□□ 0.07
CBWD3-203ENST00000377344 RBM8AQ9Y5S9 174 aaKnown RBP15.48■□□□□ 0.07
CBWD3-203ENST00000377344 PATL2C9JE40 543 aaKnown RBP15.47■□□□□ 0.07
CBWD3-203ENST00000377344 DDNO94850 711 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-203ENST00000377344 PPP4CP60510 307 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 DLGAP5Q15398 846 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 CERS3Q8IU89 383 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 MICALL2Q8IY33 904 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 TEX11Q8IYF3 940 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 DPF2Q92785 391 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 NACAP1Q9BZK3 213 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 USP40Q9NVE5 1235 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 SHTN1A0MZ66 631 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 FOXP2O15409 715 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 USP5P45974 858 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 TDO2P48775 406 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 RBM26Q5T8P6 1007 aaKnown RBP15.47■□□□□ 0.07
CBWD3-203ENST00000377344 APOBEC3HQ6NTF7 200 aaKnown RBP15.47■□□□□ 0.07
CBWD3-203ENST00000377344 DPY19L2Q6NUT2 758 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 DDRGK1Q96HY6 314 aa15.47■□□□□ 0.07
CBWD3-203ENST00000377344 CNOT7Q9UIV1 285 aaKnown RBP15.47■□□□□ 0.07
CBWD3-203ENST00000377344 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-203ENST00000377344 GSG1L2A8MUP6 293 aa15.46■□□□□ 0.07
CBWD3-203ENST00000377344 EPB41L2O43491 1005 aaKnown RBP15.46■□□□□ 0.07
CBWD3-203ENST00000377344 IFNL3Q8IZI9 196 aa15.46■□□□□ 0.07
CBWD3-203ENST00000377344 TGFBRAP1Q8WUH2 860 aa15.46■□□□□ 0.07
CBWD3-203ENST00000377344 NAPBQ9H115 298 aa15.46■□□□□ 0.07
CBWD3-203ENST00000377344 MYOZ2Q9NPC6 264 aa15.46■□□□□ 0.07
CBWD3-203ENST00000377344 FGAP02671 866 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 RHBDL3P58872 404 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 CDC42EP5Q6NZY7 148 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 PRMT6Q96LA8 375 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-203ENST00000377344 TBC1D32Q96NH3 1257 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 EPB41L4AQ9HCS5 686 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-203ENST00000377344 CTNNA3Q9UI47 895 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 H7C1D1 291 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 PICALMQ13492 652 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 RNF20Q5VTR2 975 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 MAPKAPK5Q8IW41 473 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 TDRD3Q9H7E2 651 aaKnown RBP15.45■□□□□ 0.06
CBWD3-203ENST00000377344 TSHZ2Q9NRE2 1034 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 ATP8A2Q9NTI2 1148 aa15.45■□□□□ 0.06
CBWD3-203ENST00000377344 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
CBWD3-203ENST00000377344 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
CBWD3-203ENST00000377344 LMOD1P29536 600 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-203ENST00000377344 HSPA4P34932 840 aa15.44■□□□□ 0.06
CBWD3-203ENST00000377344 MMP14P50281 582 aa15.44■□□□□ 0.06
CBWD3-203ENST00000377344 ZNF280AP59817 542 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-203ENST00000377344 NECTIN1Q15223 517 aa15.44■□□□□ 0.06
CBWD3-203ENST00000377344 CREB3L3Q68CJ9 461 aa15.44■□□□□ 0.06
CBWD3-203ENST00000377344 SAMD7Q7Z3H4 446 aa15.44■□□□□ 0.06
CBWD3-203ENST00000377344 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
CBWD3-203ENST00000377344 RPAP1Q9BWH6 1393 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-203ENST00000377344 ZC3H4Q9UPT8 1303 aaKnown RBP15.44■□□□□ 0.06
CBWD3-203ENST00000377344 MYO1BO43795 1136 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 ZKSCAN1P17029 563 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-203ENST00000377344 RBM25P49756 843 aaKnown RBP15.43■□□□□ 0.06
CBWD3-203ENST00000377344 CACNB3P54284 484 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 HAND2P61296 217 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 IMMTQ16891 758 aaKnown RBP15.43■□□□□ 0.06
CBWD3-203ENST00000377344 TBC1D10BQ4KMP7 808 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-203ENST00000377344 DCP1AQ9NPI6 582 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-203ENST00000377344 MCM9Q9NXL9 1143 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 TMOD2Q9NZR1 351 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 CLRN2A0PK11 232 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 ZNF213O14771 459 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 SLC27A2O14975 620 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 ALX1Q15699 326 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 SLC4A8Q2Y0W8 1093 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 PALD1Q9ULE6 856 aa15.43■□□□□ 0.06
CBWD3-203ENST00000377344 FLT1P17948 1338 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 MINDY4BA8MYZ0 360 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 WNT10BO00744 389 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 WDHD1O75717 1129 aaPredicted RBP15.42■□□□□ 0.06
CBWD3-203ENST00000377344 EGFRP00533 1210 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 CYP21A2P08686 494 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 EPS15P42566 896 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 KIF4BQ2VIQ3 1234 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 GIMAP6Q6P9H5 292 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 MTMR14Q8NCE2 650 aa15.42■□□□□ 0.06
CBWD3-203ENST00000377344 SAP30BPQ9UHR5 308 aaKnown RBP15.42■□□□□ 0.06
CBWD3-203ENST00000377344 GLTPD2A6NH11 291 aa15.41■□□□□ 0.06
CBWD3-203ENST00000377344 USP17L12C9JPN9 530 aa15.41■□□□□ 0.06
CBWD3-203ENST00000377344 USP17L21D6R901 530 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms