RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ISCA1Q9BUE6 129 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 SPDYE3A6NKU9 549 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 MYCP01106 439 aaPredicted RBP9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 USP17L8P0C7I0 530 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 RASGRF1Q13972 1273 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 SPICE1Q8N0Z3 855 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 SH2D4AQ9H788 454 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 NCOA5Q9HCD5 579 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 SGSM2O43147 1006 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 TRAK2O60296 914 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 PRDX5P30044 214 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 AK2P54819 239 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 RRP36Q96EU6 259 aaKnown RBP9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 EHMT1Q9H9B1 1298 aa9.78□□□□□ -0.84
CRNKL1-202ENST00000377340 IPO7O95373 1038 aaKnown RBP9.77□□□□□ -0.84
CRNKL1-202ENST00000377340 USH1GQ495M9 461 aa9.77□□□□□ -0.84
CRNKL1-202ENST00000377340 HOOK2Q96ED9 719 aa9.77□□□□□ -0.84
CRNKL1-202ENST00000377340 TNMDQ9H2S6 317 aa9.77□□□□□ -0.84
CRNKL1-202ENST00000377340 FBXO3Q9UK99 471 aa9.77□□□□□ -0.84
CRNKL1-202ENST00000377340 ZBTB21Q9ULJ3 1066 aa9.77□□□□□ -0.84
CRNKL1-202ENST00000377340 SCAF8Q9UPN6 1271 aaKnown RBP9.77□□□□□ -0.84
CRNKL1-202ENST00000377340 VWDEQ8N2E2 1590 aa9.77□□□□□ -0.84
CRNKL1-202ENST00000377340 CD163L1Q9NR16 1453 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 CALM1P0DP23 149 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 CALM2P0DP24 149 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 CALM3P0DP25 149 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 UBA7P41226 1012 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 TMEM266Q2M3C6 531 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 KLHL10Q6JEL2 608 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 CEP57L1Q8IYX8 460 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 KIFC2Q96AC6 838 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 CERKLQ49MI3 558 aaPredicted RBP9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 GADL1Q6ZQY3 521 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 TBC1D32Q96NH3 1257 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 RAB34Q9BZG1 259 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 TDRD3Q9H7E2 651 aaKnown RBP9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 CD209Q9NNX6 404 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 CEP131Q9UPN4 1083 aa9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 V9GY48 417 aaPredicted RBP9.77□□□□□ -0.85
CRNKL1-202ENST00000377340 PRKAB2O43741 272 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 BAG4O95429 457 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 NKX1-1Q15270 411 aaPredicted RBP9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 SLFNL1Q499Z3 407 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 IFNL3Q8IZI9 196 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 HAUS7Q99871 368 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 ZBTB12Q9Y330 459 aaPredicted RBP9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 PATL2C9JE40 543 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 CIAO1O76071 339 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 DCAF15Q66K64 600 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 LRRC47Q8N1G4 583 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 COA1Q9GZY4 146 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 MROH1Q8NDA8 1641 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 SLC27A2O14975 620 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 STX6O43752 255 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 GDF11O95390 407 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 CCDC174Q6PII3 467 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 SIRT2Q8IXJ6 389 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 MEGF6O75095 1541 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 PTPDC1A2A3K4 754 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 ECE2O60344 883 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 MBD3O95983 291 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 FGAP02671 866 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 GPSM2P81274 684 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 PPARAQ07869 468 aa9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 CMTR1Q8N1G2 835 aaKnown RBP9.76□□□□□ -0.85
CRNKL1-202ENST00000377340 MROH2AA6NES4 1674 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 CYP2D7A0A087X1C5 515 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 GYS1P13807 737 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 RBM25P49756 843 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 ZFYVE27Q5T4F4 411 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 INTS5Q6P9B9 1019 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 NAT10Q9H0A0 1025 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 IBTKQ9P2D0 1353 aaPredicted RBP9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 AKNAD1Q5T1N1 836 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 MPHOSPH6Q99547 160 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 USP26Q9BXU7 913 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 C3P01024 1663 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 USP42Q9H9J4 1324 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 FAM196BA6NMK8 535 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 CFBP00751 764 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 GOLGA8HP0CJ92 632 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 TRAF1Q13077 416 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 CFAP100Q494V2 611 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 MED14O60244 1454 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 RNF123Q5XPI4 1314 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 RAD50Q92878 1312 aa9.75□□□□□ -0.85
CRNKL1-202ENST00000377340 HSPD1P10809 573 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 NAP1L1P55209 391 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 PTH1RQ03431 593 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 STIM1Q13586 685 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 CCDC148Q8NFR7 591 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 SLC16A10Q8TF71 515 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 UBE2Q2Q8WVN8 375 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 C6orf50Q9HD87 102 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 MAGEC2Q9UBF1 373 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 ANGEL1Q9UNK9 670 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 SMC2O95347 1197 aa9.74□□□□□ -0.85
CRNKL1-202ENST00000377340 MARCKSP29966 332 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms