RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 TNS2Q63HR2 1409 aa18.84■□□□□ 0.61
TRIM27-202ENST00000377199 PDCL2Q8N4E4 241 aa18.84■□□□□ 0.61
TRIM27-202ENST00000377199 PLA2G12BQ9BX93 195 aa18.84■□□□□ 0.61
TRIM27-202ENST00000377199 XPO4Q9C0E2 1151 aaKnown RBP18.84■□□□□ 0.61
TRIM27-202ENST00000377199 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
TRIM27-202ENST00000377199 PARP4Q9UKK3 1724 aaKnown RBP18.84■□□□□ 0.61
TRIM27-202ENST00000377199 NWD2Q9ULI1 1742 aa18.84■□□□□ 0.61
TRIM27-202ENST00000377199 SH2B2O14492 632 aaPredicted RBP18.83■□□□□ 0.61
TRIM27-202ENST00000377199 IARSP41252 1262 aaKnown RBP18.83■□□□□ 0.61
TRIM27-202ENST00000377199 TTF1Q15361 905 aaPredicted RBP18.83■□□□□ 0.61
TRIM27-202ENST00000377199 BRAPQ7Z569 592 aa18.83■□□□□ 0.61
TRIM27-202ENST00000377199 PDE8AO60658 829 aa18.83■□□□□ 0.6
TRIM27-202ENST00000377199 YEATS4O95619 227 aa18.83■□□□□ 0.6
TRIM27-202ENST00000377199 RASGRF1Q13972 1273 aa18.83■□□□□ 0.6
TRIM27-202ENST00000377199 TRIM29Q14134 588 aa18.83■□□□□ 0.6
TRIM27-202ENST00000377199 CEP135Q66GS9 1140 aa18.83■□□□□ 0.6
TRIM27-202ENST00000377199 CPLX2Q6PUV4 134 aaKnown RBP18.83■□□□□ 0.6
TRIM27-202ENST00000377199 SARM1Q6SZW1 724 aa18.83■□□□□ 0.6
TRIM27-202ENST00000377199 CCDC112Q8NEF3 446 aa18.83■□□□□ 0.6
TRIM27-202ENST00000377199 NPHP1O15259 732 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 SYKP43405 635 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 VGLL2Q8N8G2 317 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 ZSWIM5Q9P217 1185 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 ABCC6O95255 1503 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 ZMYM6O95789 1325 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 A0A1W2PQ27 194 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 A0A1W2PQ64 194 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 A0A1W2PQD8 194 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 TDO2P48775 406 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 BCAMP50895 628 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 PNOCQ13519 176 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 SPATA5Q8NB90 893 aa18.82■□□□□ 0.6
TRIM27-202ENST00000377199 U2AF2P26368 475 aaKnown RBP eCLIP18.81■□□□□ 0.62e-15■■■■□ 22.7
TRIM27-202ENST00000377199 NUP133Q8WUM0 1156 aa18.81■□□□□ 0.6
TRIM27-202ENST00000377199 STRBPQ96SI9 672 aaKnown RBP18.81■□□□□ 0.6
TRIM27-202ENST00000377199 EPB41L4AQ9HCS5 686 aaPredicted RBP18.81■□□□□ 0.6
TRIM27-202ENST00000377199 KCNJ14Q9UNX9 436 aa18.81■□□□□ 0.6
TRIM27-202ENST00000377199 SLC12A7Q9Y666 1083 aa18.81■□□□□ 0.6
TRIM27-202ENST00000377199 RANBP6O60518 1105 aaKnown RBP18.81■□□□□ 0.6
TRIM27-202ENST00000377199 ATP1A3P13637 1013 aa18.81■□□□□ 0.6
TRIM27-202ENST00000377199 PUM3Q15397 648 aaKnown RBP18.81■□□□□ 0.6
TRIM27-202ENST00000377199 AXDND1Q5T1B0 1012 aaPredicted RBP18.81■□□□□ 0.6
TRIM27-202ENST00000377199 CCDC94Q9BW85 323 aaPredicted RBP18.81■□□□□ 0.6
TRIM27-202ENST00000377199 GUCY1A2P33402 732 aa18.81■□□□□ 0.6
TRIM27-202ENST00000377199 IFNL3Q8IZI9 196 aa18.81■□□□□ 0.6
TRIM27-202ENST00000377199 ABCF2Q9UG63 623 aa18.81■□□□□ 0.6
TRIM27-202ENST00000377199 UBR2Q8IWV8 1755 aa18.8■□□□□ 0.6
TRIM27-202ENST00000377199 CDC25BP30305 580 aa18.8■□□□□ 0.6
TRIM27-202ENST00000377199 PTPN14Q15678 1187 aa18.8■□□□□ 0.6
TRIM27-202ENST00000377199 UBE3CQ15386 1083 aa18.8■□□□□ 0.6
TRIM27-202ENST00000377199 SUSD4Q5VX71 490 aa18.8■□□□□ 0.6
TRIM27-202ENST00000377199 NBPF11Q86T75 865 aa18.8■□□□□ 0.6
TRIM27-202ENST00000377199 FBXL16Q8N461 479 aa18.8■□□□□ 0.6
TRIM27-202ENST00000377199 LPIN2Q92539 896 aa18.8■□□□□ 0.6
TRIM27-202ENST00000377199 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 EXOC5O00471 708 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 CDKL5O76039 1030 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 MAP3K12Q12852 859 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 LY9Q9HBG7 655 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 MINDY4BA8MYZ0 360 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 SMIM22K7EJ46 135 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 CCZ1BP86790 482 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 CCZ1P86791 482 aaPredicted RBP18.79■□□□□ 0.6
TRIM27-202ENST00000377199 SLC39A14Q15043 492 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 SHC4Q6S5L8 630 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 LCORLQ8N3X6 602 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 IGDCC4Q8TDY8 1250 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 LRP2BPQ9P2M1 347 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 TACC3Q9Y6A5 838 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 SLC4A4Q9Y6R1 1079 aa18.79■□□□□ 0.6
TRIM27-202ENST00000377199 GOLGA8FQ08AF8 430 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 GOLGA8DPQ0D2H9 430 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 hCG_1642624A0A1W2PR95 340 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 WTIPA6NIX2 430 aaPredicted RBP18.78■□□□□ 0.6
TRIM27-202ENST00000377199 BTBD18B2RXH4 712 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 SLC5A1P13866 664 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 PLEKHG2Q9H7P9 1386 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 TCRBV5S4A2TA0A5A2 114 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 SMTNL1A8MU46 457 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 FOXN1O15353 648 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 CMA1P23946 247 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 NCBP1Q09161 790 aaKnown RBP18.78■□□□□ 0.6
TRIM27-202ENST00000377199 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 PDILTQ8N807 584 aa18.78■□□□□ 0.6
TRIM27-202ENST00000377199 MYO5AQ9Y4I1 1855 aaKnown RBP18.77■□□□□ 0.6
TRIM27-202ENST00000377199 UQCRFS1P1P0C7P4 283 aa18.77■□□□□ 0.6
TRIM27-202ENST00000377199 TICAM2Q86XR7 235 aa18.77■□□□□ 0.6
TRIM27-202ENST00000377199 SDR42E1Q8WUS8 393 aa18.77■□□□□ 0.6
TRIM27-202ENST00000377199 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
TRIM27-202ENST00000377199 SERPINC1P01008 464 aa18.77■□□□□ 0.59
TRIM27-202ENST00000377199 NLRP12P59046 1061 aa18.77■□□□□ 0.59
TRIM27-202ENST00000377199 SSRP1Q08945 709 aaKnown RBP18.77■□□□□ 0.59
TRIM27-202ENST00000377199 MYH15Q9Y2K3 1946 aa18.77■□□□□ 0.59
TRIM27-202ENST00000377199 PATL2C9JE40 543 aaKnown RBP18.76■□□□□ 0.59
TRIM27-202ENST00000377199 TPM4P67936 248 aa18.76■□□□□ 0.59
TRIM27-202ENST00000377199 FAM217BQ9NTX9 383 aaPredicted RBP18.76■□□□□ 0.59
TRIM27-202ENST00000377199 ARID4AP29374 1257 aaPredicted RBP18.76■□□□□ 0.59
TRIM27-202ENST00000377199 GRIN1Q05586 938 aa18.76■□□□□ 0.59
TRIM27-202ENST00000377199 LONRF3Q496Y0 759 aa18.76■□□□□ 0.59
TRIM27-202ENST00000377199 CNNM3Q8NE01 707 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms