RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PNOCQ13519 176 aa13.48□□□□□ -0.25
DDR1-227ENST00000376570 IFIT1BQ5T764 474 aaKnown RBP13.48□□□□□ -0.25
DDR1-227ENST00000376570 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
DDR1-227ENST00000376570 DNA2P51530 1060 aa13.48□□□□□ -0.25
DDR1-227ENST00000376570 SLC51AQ86UW1 340 aa13.48□□□□□ -0.25
DDR1-227ENST00000376570 AMOTL1Q8IY63 956 aa13.48□□□□□ -0.25
DDR1-227ENST00000376570 PCDHA7Q9UN72 937 aa13.48□□□□□ -0.25
DDR1-227ENST00000376570 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
DDR1-227ENST00000376570 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
DDR1-227ENST00000376570 MCM7P33993 719 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 CYB5R4Q7L1T6 521 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 TM6SF1Q9BZW5 370 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 DIXDC1Q155Q3 683 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 IQCA1Q86XH1 822 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 MAPKAPK5Q8IW41 473 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 ANO10Q9NW15 660 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 SKILP12757 684 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
DDR1-227ENST00000376570 IFNL3Q8IZI9 196 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
DDR1-227ENST00000376570 RPGRQ92834 1020 aaKnown RBP13.47□□□□□ -0.25
DDR1-227ENST00000376570 CYP2D6P10635 497 aa13.46□□□□□ -0.25
DDR1-227ENST00000376570 TTF1Q15361 905 aaPredicted RBP13.46□□□□□ -0.25
DDR1-227ENST00000376570 CTCFLQ8NI51 663 aaPredicted RBP13.46□□□□□ -0.25
DDR1-227ENST00000376570 DYNC1I1O14576 645 aa13.46□□□□□ -0.25
DDR1-227ENST00000376570 CDKL5O76039 1030 aa13.46□□□□□ -0.25
DDR1-227ENST00000376570 ZFYP08048 801 aaPredicted RBP13.46□□□□□ -0.25
DDR1-227ENST00000376570 ZSCAN16Q9H4T2 348 aaPredicted RBP13.46□□□□□ -0.25
DDR1-227ENST00000376570 ZSWIM5Q9P217 1185 aa13.46□□□□□ -0.25
DDR1-227ENST00000376570 LPIN2Q92539 896 aa13.46□□□□□ -0.26
DDR1-227ENST00000376570 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.26
DDR1-227ENST00000376570 NEURL4Q96JN8 1562 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 SSH2Q76I76 1423 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 VWA3AA6NCI4 1184 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 UQCRFS1P1P0C7P4 283 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 XBP1P17861 261 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 STX1AQ16623 288 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 HEATR3Q7Z4Q2 680 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 ITSN1Q15811 1721 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 POLR2DO15514 142 aaKnown RBP13.45□□□□□ -0.26
DDR1-227ENST00000376570 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 CATIPQ7Z7H3 387 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 SMYD4Q8IYR2 804 aaPredicted RBP13.45□□□□□ -0.26
DDR1-227ENST00000376570 CCDC112Q8NEF3 446 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 GOLPH3LQ9H4A5 285 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 KLRK1P26718 216 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 NAA30Q147X3 362 aaPredicted RBP13.45□□□□□ -0.26
DDR1-227ENST00000376570 JMYQ8N9B5 988 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
DDR1-227ENST00000376570 TRIM34Q9BYJ4 488 aa13.45□□□□□ -0.26
DDR1-227ENST00000376570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.45□□□□□ -0.26
DDR1-227ENST00000376570 ZNF202O95125 648 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 CYP19A1P11511 503 aaPredicted RBP13.44□□□□□ -0.26
DDR1-227ENST00000376570 U2AF2P26368 475 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDR1-227ENST00000376570 DPCR1Q3MIW9 517 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 ANO1Q5XXA6 986 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 ZNF444Q8N0Y2 327 aaPredicted RBP13.44□□□□□ -0.26
DDR1-227ENST00000376570 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 BLZF1Q9H2G9 400 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 CGNQ9P2M7 1197 aaKnown RBP13.44□□□□□ -0.26
DDR1-227ENST00000376570 RTCBQ9Y3I0 505 aaKnown RBP13.44□□□□□ -0.26
DDR1-227ENST00000376570 SFPQP23246 707 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDR1-227ENST00000376570 GUCY1A2P33402 732 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 SLC4A9Q96Q91 983 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 NEDD4P46934 1319 aa13.44□□□□□ -0.26
DDR1-227ENST00000376570 PEAK1Q9H792 1746 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 PFKFB2O60825 505 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 PRDX5P30044 214 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 CDC27P30260 824 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 MYSM1Q5VVJ2 828 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 CLSTN2Q9H4D0 955 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 TGFBRAP1Q8WUH2 860 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 DSCC1Q9BVC3 393 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 EVX2Q03828 476 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 TCP10Q12799 353 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 ITPK1Q13572 414 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
DDR1-227ENST00000376570 PIK3AP1Q6ZUJ8 805 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 SLC44A5Q8NCS7 719 aa13.43□□□□□ -0.26
DDR1-227ENST00000376570 KIF28PB7ZC32 967 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 FOXN1O15353 648 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 URI1O94763 535 aaPredicted RBP13.42□□□□□ -0.26
DDR1-227ENST00000376570 PPARDQ03181 441 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 MTERF4Q7Z6M4 381 aaKnown RBP13.42□□□□□ -0.26
DDR1-227ENST00000376570 RESTQ13127 1097 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 KARSQ15046 597 aaKnown RBP13.42□□□□□ -0.26
DDR1-227ENST00000376570 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 ESR2Q92731 530 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 CCT6AP40227 531 aaKnown RBP13.42□□□□□ -0.26
DDR1-227ENST00000376570 SCNN1DP51172 638 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 UBASH3AP57075 661 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 MNS1Q8NEH6 495 aa13.42□□□□□ -0.26
DDR1-227ENST00000376570 AP5Z1O43299 807 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 PFKFB1P16118 471 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 ADD2P35612 726 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 FAM160A1Q05DH4 1040 aa13.41□□□□□ -0.26
DDR1-227ENST00000376570 CCDC96Q2M329 555 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms