RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 NKX2-3Q8TAU0 364 aa20.85■□□□□ 0.93
CTTN-203ENST00000376561 KIAA1551Q9HCM1 1747 aa20.85■□□□□ 0.93
CTTN-203ENST00000376561 B4E1Z4 1266 aa20.85■□□□□ 0.93
CTTN-203ENST00000376561 AKNAD1Q5T1N1 836 aa20.85■□□□□ 0.93
CTTN-203ENST00000376561 MTMR6Q9Y217 621 aa20.85■□□□□ 0.93
CTTN-203ENST00000376561 C6orf229H3BNL8 230 aa20.84■□□□□ 0.93
CTTN-203ENST00000376561 LDHBP07195 334 aaKnown RBP20.84■□□□□ 0.93
CTTN-203ENST00000376561 PDIA4P13667 645 aaKnown RBP20.84■□□□□ 0.93
CTTN-203ENST00000376561 SKOR2Q2VWA4 1001 aaPredicted RBP20.84■□□□□ 0.93
CTTN-203ENST00000376561 LARP1BQ659C4 914 aaKnown RBP20.84■□□□□ 0.93
CTTN-203ENST00000376561 CYB5R4Q7L1T6 521 aa20.84■□□□□ 0.93
CTTN-203ENST00000376561 DZIP1Q86YF9 867 aaKnown RBP20.84■□□□□ 0.93
CTTN-203ENST00000376561 LLPHQ9BRT6 129 aaKnown RBP20.84■□□□□ 0.93
CTTN-203ENST00000376561 JAK2O60674 1132 aa20.84■□□□□ 0.93
CTTN-203ENST00000376561 PDCP20941 246 aa20.84■□□□□ 0.93
CTTN-203ENST00000376561 SF3B2Q13435 895 aaKnown RBP20.84■□□□□ 0.93
CTTN-203ENST00000376561 STAG1Q8WVM7 1258 aa20.84■□□□□ 0.93
CTTN-203ENST00000376561 INCENPQ9NQS7 918 aa20.84■□□□□ 0.93
CTTN-203ENST00000376561 AATFQ9NY61 560 aaKnown RBP eCLIP20.84■□□□□ 0.93
CTTN-203ENST00000376561 NAP1L2Q9ULW6 460 aaPredicted RBP20.84■□□□□ 0.93
CTTN-203ENST00000376561 TACC3Q9Y6A5 838 aa20.84■□□□□ 0.93
CTTN-203ENST00000376561 BAG6P46379 1132 aa20.83■□□□□ 0.93
CTTN-203ENST00000376561 CCT2P78371 535 aaKnown RBP20.83■□□□□ 0.93
CTTN-203ENST00000376561 CNNM2Q9H8M5 875 aa20.83■□□□□ 0.93
CTTN-203ENST00000376561 LMBRD1Q9NUN5 540 aa20.83■□□□□ 0.93
CTTN-203ENST00000376561 F13A1P00488 732 aa20.82■□□□□ 0.92
CTTN-203ENST00000376561 MFSD6Q6ZSS7 791 aa20.82■□□□□ 0.92
CTTN-203ENST00000376561 SMARCC2Q8TAQ2 1214 aa20.82■□□□□ 0.92
CTTN-203ENST00000376561 BRPF3Q9ULD4 1205 aa20.82■□□□□ 0.92
CTTN-203ENST00000376561 DEKP35659 375 aaKnown RBP20.82■□□□□ 0.92
CTTN-203ENST00000376561 PPARAQ07869 468 aa20.82■□□□□ 0.92
CTTN-203ENST00000376561 BAZ2AQ9UIF9 1905 aaKnown RBP20.82■□□□□ 0.92
CTTN-203ENST00000376561 DUOX1Q9NRD9 1551 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 GIMAP6Q6P9H5 292 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 DEFB132Q7Z7B7 95 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 NSUN7Q8NE18 718 aaKnown RBP20.81■□□□□ 0.92
CTTN-203ENST00000376561 KRT23Q9C075 422 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 ANAPC4Q9UJX5 808 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 ANGEL1Q9UNK9 670 aaKnown RBP20.81■□□□□ 0.92
CTTN-203ENST00000376561 KLF18A0A0U1RQI7 1052 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 VPS37CA5D8V6 355 aaPredicted RBP20.81■□□□□ 0.92
CTTN-203ENST00000376561 CTDNEP1O95476 244 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 GRIK5Q16478 980 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 OLFM4Q6UX06 510 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 C2CD5Q86YS7 1000 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 MPNDQ8N594 471 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 ZNF622Q969S3 477 aaKnown RBP eCLIP20.81■□□□□ 0.926e-7■□□□□ 11
CTTN-203ENST00000376561 CHMP4CQ96CF2 233 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 TMEM87BQ96K49 555 aa20.81■□□□□ 0.92
CTTN-203ENST00000376561 NCOA5Q9HCD5 579 aaKnown RBP20.81■□□□□ 0.92
CTTN-203ENST00000376561 MINDY4BA8MYZ0 360 aa20.8■□□□□ 0.92
CTTN-203ENST00000376561 SH2B2O14492 632 aaPredicted RBP20.8■□□□□ 0.92
CTTN-203ENST00000376561 KDM4AO75164 1064 aa20.8■□□□□ 0.92
CTTN-203ENST00000376561 FOXD4L6Q3SYB3 417 aaPredicted RBP20.8■□□□□ 0.92
CTTN-203ENST00000376561 FOXD4L3Q6VB84 417 aaPredicted RBP20.8■□□□□ 0.92
CTTN-203ENST00000376561 CRNKL1Q9BZJ0 848 aaKnown RBP20.8■□□□□ 0.92
CTTN-203ENST00000376561 RNF41Q9H4P4 317 aaPredicted RBP20.8■□□□□ 0.92
CTTN-203ENST00000376561 ZSWIM5Q9P217 1185 aa20.8■□□□□ 0.92
CTTN-203ENST00000376561 PRPF40AO75400 957 aaKnown RBP20.8■□□□□ 0.92
CTTN-203ENST00000376561 TCHHQ07283 1943 aa20.79■□□□□ 0.92
CTTN-203ENST00000376561 H0YIN7 160 aa20.79■□□□□ 0.92
CTTN-203ENST00000376561 IGDCC4Q8TDY8 1250 aa20.79■□□□□ 0.92
CTTN-203ENST00000376561 DDX11Q96FC9 970 aa20.79■□□□□ 0.92
CTTN-203ENST00000376561 HPS5Q9UPZ3 1129 aa20.79■□□□□ 0.92
CTTN-203ENST00000376561 ATP6V1DQ9Y5K8 247 aa20.79■□□□□ 0.92
CTTN-203ENST00000376561 GOLGA8BA8MQT2 603 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 GSTO1P78417 241 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 DPP8Q6V1X1 898 aaPredicted RBP20.78■□□□□ 0.92
CTTN-203ENST00000376561 TMX4Q9H1E5 349 aaPredicted RBP20.78■□□□□ 0.92
CTTN-203ENST00000376561 ATP8A2Q9NTI2 1148 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 PTPDC1A2A3K4 754 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 RIMBP2O15034 1052 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 HMGN5P82970 282 aaKnown RBP20.78■□□□□ 0.92
CTTN-203ENST00000376561 STYK1Q6J9G0 422 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 CDC37L1Q7L3B6 337 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 STK11IPQ8N1F8 1099 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 COA1Q9GZY4 146 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 GZF1Q9H116 711 aaPredicted RBP20.78■□□□□ 0.92
CTTN-203ENST00000376561 DCP1AQ9NPI6 582 aaPredicted RBP20.78■□□□□ 0.92
CTTN-203ENST00000376561 TOMM22Q9NS69 142 aa20.78■□□□□ 0.92
CTTN-203ENST00000376561 DDX49Q9Y6V7 483 aaKnown RBP20.78■□□□□ 0.92
CTTN-203ENST00000376561 DIXDC1Q155Q3 683 aa20.77■□□□□ 0.92
CTTN-203ENST00000376561 KLHL40Q2TBA0 621 aa20.77■□□□□ 0.92
CTTN-203ENST00000376561 RRP12Q5JTH9 1297 aaKnown RBP20.77■□□□□ 0.92
CTTN-203ENST00000376561 CTR9Q6PD62 1173 aa20.77■□□□□ 0.92
CTTN-203ENST00000376561 FAM184AQ8NB25 1140 aa20.77■□□□□ 0.92
CTTN-203ENST00000376561 MYH2Q9UKX2 1941 aa20.77■□□□□ 0.92
CTTN-203ENST00000376561 SMIM22K7EJ46 135 aa20.77■□□□□ 0.91
CTTN-203ENST00000376561 TBC1D22AQ8WUA7 517 aa20.77■□□□□ 0.91
CTTN-203ENST00000376561 ZC3H12CQ9C0D7 883 aaKnown RBP20.77■□□□□ 0.91
CTTN-203ENST00000376561 PDGFDQ9GZP0 370 aaPredicted RBP20.77■□□□□ 0.91
CTTN-203ENST00000376561 LY9Q9HBG7 655 aa20.77■□□□□ 0.91
CTTN-203ENST00000376561 FAM205AQ6ZU69 1335 aa20.77■□□□□ 0.91
CTTN-203ENST00000376561 USP17L12C9JPN9 530 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 USP17L21D6R901 530 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 LDHCP07864 332 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 TMEM67Q5HYA8 995 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 MFSD14BQ5SR56 506 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 CYP2D7A0A087X1C5 515 aa20.76■□□□□ 0.91
CTTN-203ENST00000376561 IFIT3O14879 490 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms