RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 GMPSP49915 693 aaPredicted RBP27.46■■□□□ 1.99
HLA-C-202ENST00000376237 LCORLQ8N3X6 602 aa27.46■■□□□ 1.99
HLA-C-202ENST00000376237 RBM5P52756 815 aaKnown RBP eCLIP27.45■■□□□ 1.98
HLA-C-202ENST00000376237 DYNLL1P63167 89 aaKnown RBP27.45■■□□□ 1.98
HLA-C-202ENST00000376237 CRNKL1Q9BZJ0 848 aaKnown RBP27.45■■□□□ 1.98
HLA-C-202ENST00000376237 HSPD1P10809 573 aaKnown RBP27.44■■□□□ 1.98
HLA-C-202ENST00000376237 ZNF280AP59817 542 aaPredicted RBP27.44■■□□□ 1.98
HLA-C-202ENST00000376237 MTMR14Q8NCE2 650 aa27.44■■□□□ 1.98
HLA-C-202ENST00000376237 MAP4K1Q92918 833 aa27.44■■□□□ 1.98
HLA-C-202ENST00000376237 USP26Q9BXU7 913 aa27.44■■□□□ 1.98
HLA-C-202ENST00000376237 PATL2C9JE40 543 aaKnown RBP27.43■■□□□ 1.98
HLA-C-202ENST00000376237 CFAP100Q494V2 611 aa27.43■■□□□ 1.98
HLA-C-202ENST00000376237 APOBEC3HQ6NTF7 200 aaKnown RBP27.43■■□□□ 1.98
HLA-C-202ENST00000376237 TIAM2Q8IVF5 1701 aa27.43■■□□□ 1.98
HLA-C-202ENST00000376237 DLGAP5Q15398 846 aa27.42■■□□□ 1.98
HLA-C-202ENST00000376237 CNOT7Q9UIV1 285 aaKnown RBP27.42■■□□□ 1.98
HLA-C-202ENST00000376237 SLC4A4Q9Y6R1 1079 aa27.42■■□□□ 1.98
HLA-C-202ENST00000376237 MYH2Q9UKX2 1941 aa27.42■■□□□ 1.98
HLA-C-202ENST00000376237 PTH1RQ03431 593 aa27.41■■□□□ 1.98
HLA-C-202ENST00000376237 VPS53Q5VIR6 699 aa27.41■■□□□ 1.98
HLA-C-202ENST00000376237 NACAP1Q9BZK3 213 aa27.41■■□□□ 1.98
HLA-C-202ENST00000376237 U3KPZ7 1027 aaPredicted RBP27.41■■□□□ 1.98
HLA-C-202ENST00000376237 H7C1D1 291 aa27.41■■□□□ 1.98
HLA-C-202ENST00000376237 DDNO94850 711 aaPredicted RBP27.41■■□□□ 1.98
HLA-C-202ENST00000376237 RHBDL3P58872 404 aa27.41■■□□□ 1.98
HLA-C-202ENST00000376237 GIMAP6Q6P9H5 292 aa27.41■■□□□ 1.98
HLA-C-202ENST00000376237 MYOZ2Q9NPC6 264 aa27.41■■□□□ 1.98
HLA-C-202ENST00000376237 ATP8A2Q9NTI2 1148 aa27.41■■□□□ 1.98
HLA-C-202ENST00000376237 APPP05067 770 aa27.4■■□□□ 1.98
HLA-C-202ENST00000376237 MICALL2Q8IY33 904 aa27.4■■□□□ 1.98
HLA-C-202ENST00000376237 SH3RF3Q8TEJ3 882 aaPredicted RBP27.4■■□□□ 1.98
HLA-C-202ENST00000376237 DDRGK1Q96HY6 314 aa27.4■■□□□ 1.98
HLA-C-202ENST00000376237 GPRC5DQ9NZD1 345 aa27.4■■□□□ 1.98
HLA-C-202ENST00000376237 CTNNA3Q9UI47 895 aa27.4■■□□□ 1.98
HLA-C-202ENST00000376237 SPDYE2BA6NHP3 402 aa27.39■■□□□ 1.98
HLA-C-202ENST00000376237 GSG1L2A8MUP6 293 aa27.39■■□□□ 1.98
HLA-C-202ENST00000376237 SPDYE6P0CI01 402 aa27.39■■□□□ 1.98
HLA-C-202ENST00000376237 MCCP23508 829 aa27.39■■□□□ 1.98
HLA-C-202ENST00000376237 ALX1Q15699 326 aa27.39■■□□□ 1.98
HLA-C-202ENST00000376237 USP40Q9NVE5 1235 aa27.39■■□□□ 1.98
HLA-C-202ENST00000376237 GLTPD2A6NH11 291 aa27.38■■□□□ 1.97
HLA-C-202ENST00000376237 TEX11Q8IYF3 940 aa27.38■■□□□ 1.97
HLA-C-202ENST00000376237 RBM8AQ9Y5S9 174 aaKnown RBP27.38■■□□□ 1.97
HLA-C-202ENST00000376237 ZMYM6O95789 1325 aa27.38■■□□□ 1.97
HLA-C-202ENST00000376237 FOXP2O15409 715 aa27.37■■□□□ 1.97
HLA-C-202ENST00000376237 PRKAB2O43741 272 aa27.37■■□□□ 1.97
HLA-C-202ENST00000376237 CDC42EP5Q6NZY7 148 aa27.37■■□□□ 1.97
HLA-C-202ENST00000376237 IFNL3Q8IZI9 196 aa27.37■■□□□ 1.97
HLA-C-202ENST00000376237 PRMT6Q96LA8 375 aaPredicted RBP27.37■■□□□ 1.97
HLA-C-202ENST00000376237 FGAP02671 866 aa27.36■■□□□ 1.97
HLA-C-202ENST00000376237 LMOD1P29536 600 aaPredicted RBP27.36■■□□□ 1.97
HLA-C-202ENST00000376237 USP5P45974 858 aa27.36■■□□□ 1.97
HLA-C-202ENST00000376237 SDR42E1Q8WUS8 393 aa27.36■■□□□ 1.97
HLA-C-202ENST00000376237 ZBED3Q96IU2 234 aaPredicted RBP27.36■■□□□ 1.97
HLA-C-202ENST00000376237 L3MBTL3Q96JM7 780 aaPredicted RBP27.36■■□□□ 1.97
HLA-C-202ENST00000376237 C22orf23Q9BZE7 217 aa27.36■■□□□ 1.97
HLA-C-202ENST00000376237 UTRNP46939 3433 aa27.36■■□□□ 1.97
HLA-C-202ENST00000376237 MYO1BO43795 1136 aa27.36■■□□□ 1.97
HLA-C-202ENST00000376237 NECTIN1Q15223 517 aa27.36■■□□□ 1.97
HLA-C-202ENST00000376237 NAPBQ9H115 298 aa27.36■■□□□ 1.97
HLA-C-202ENST00000376237 HSPA4P34932 840 aa27.35■■□□□ 1.97
HLA-C-202ENST00000376237 RNF20Q5VTR2 975 aa27.35■■□□□ 1.97
HLA-C-202ENST00000376237 DCP1AQ9NPI6 582 aaPredicted RBP27.35■■□□□ 1.97
HLA-C-202ENST00000376237 PCDHAC2Q9Y5I4 1007 aa27.35■■□□□ 1.97
HLA-C-202ENST00000376237 WNT10BO00744 389 aa27.34■■□□□ 1.97
HLA-C-202ENST00000376237 NPM3O75607 178 aaKnown RBP27.34■■□□□ 1.97
HLA-C-202ENST00000376237 TDO2P48775 406 aa27.34■■□□□ 1.97
HLA-C-202ENST00000376237 RBM25P49756 843 aaKnown RBP27.34■■□□□ 1.97
HLA-C-202ENST00000376237 TGFBRAP1Q8WUH2 860 aa27.34■■□□□ 1.97
HLA-C-202ENST00000376237 IDI2Q9BXS1 227 aa27.34■■□□□ 1.97
HLA-C-202ENST00000376237 TMOD2Q9NZR1 351 aa27.34■■□□□ 1.97
HLA-C-202ENST00000376237 TBC1D32Q96NH3 1257 aa27.33■■□□□ 1.97
HLA-C-202ENST00000376237 TDRD3Q9H7E2 651 aaKnown RBP27.33■■□□□ 1.97
HLA-C-202ENST00000376237 EPB41L4AQ9HCS5 686 aaPredicted RBP27.33■■□□□ 1.97
HLA-C-202ENST00000376237 MKRN1Q9UHC7 482 aaKnown RBP27.33■■□□□ 1.97
HLA-C-202ENST00000376237 SHTN1A0MZ66 631 aa27.32■■□□□ 1.96
HLA-C-202ENST00000376237 WDHD1O75717 1129 aaPredicted RBP27.32■■□□□ 1.96
HLA-C-202ENST00000376237 KIF4BQ2VIQ3 1234 aa27.32■■□□□ 1.96
HLA-C-202ENST00000376237 IMMTQ16891 758 aaKnown RBP27.31■■□□□ 1.96
HLA-C-202ENST00000376237 SPDYE2Q495Y8 402 aa27.31■■□□□ 1.96
HLA-C-202ENST00000376237 FKBP1CQ5VVH2 108 aa27.31■■□□□ 1.96
HLA-C-202ENST00000376237 SAMD7Q7Z3H4 446 aa27.31■■□□□ 1.96
HLA-C-202ENST00000376237 ADARB2Q9NS39 739 aaKnown RBP27.31■■□□□ 1.96
HLA-C-202ENST00000376237 ZKSCAN1P17029 563 aaPredicted RBP27.31■■□□□ 1.96
HLA-C-202ENST00000376237 EPS15P42566 896 aa27.31■■□□□ 1.96
HLA-C-202ENST00000376237 ANAPC15P60006 121 aa27.31■■□□□ 1.96
HLA-C-202ENST00000376237 TBC1D10BQ4KMP7 808 aaPredicted RBP27.31■■□□□ 1.96
HLA-C-202ENST00000376237 RBM26Q5T8P6 1007 aaKnown RBP27.31■■□□□ 1.96
HLA-C-202ENST00000376237 CREB3L3Q68CJ9 461 aa27.31■■□□□ 1.96
HLA-C-202ENST00000376237 ZNF70Q9UC06 446 aaPredicted RBP27.31■■□□□ 1.96
HLA-C-202ENST00000376237 ZNF213O14771 459 aa27.3■■□□□ 1.96
HLA-C-202ENST00000376237 SBK1Q52WX2 424 aa27.3■■□□□ 1.96
HLA-C-202ENST00000376237 MAPKAPK5Q8IW41 473 aa27.3■■□□□ 1.96
HLA-C-202ENST00000376237 AMOTL1Q8IY63 956 aa27.3■■□□□ 1.96
HLA-C-202ENST00000376237 KCNB2Q92953 911 aa27.3■■□□□ 1.96
HLA-C-202ENST00000376237 ARPP21Q9UBL0 812 aaPredicted RBP27.3■■□□□ 1.96
HLA-C-202ENST00000376237 FLT1P17948 1338 aa27.3■■□□□ 1.96
HLA-C-202ENST00000376237 ADAMTSL1Q8N6G6 1762 aa27.3■■□□□ 1.96
HLA-C-202ENST00000376237 IQCA1LA6NCM1 817 aa27.29■■□□□ 1.96
HLA-C-202ENST00000376237 SLC27A2O14975 620 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms