RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 DNAI2Q9GZS0 605 aa15.44■□□□□ 0.06
C9orf47-203ENST00000375851 CCDC113Q9H0I3 377 aa15.44■□□□□ 0.06
C9orf47-203ENST00000375851 PRDM15P57071 1507 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-203ENST00000375851 RPS8P62241 208 aaKnown RBP15.44■□□□□ 0.06
C9orf47-203ENST00000375851 CDC37L1Q7L3B6 337 aa15.44■□□□□ 0.06
C9orf47-203ENST00000375851 CCDC172P0C7W6 258 aa15.44■□□□□ 0.06
C9orf47-203ENST00000375851 SPECC1Q5M775 1068 aa15.44■□□□□ 0.06
C9orf47-203ENST00000375851 KCNH3Q9ULD8 1083 aa15.44■□□□□ 0.06
C9orf47-203ENST00000375851 NEBLO76041 1014 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 CCDC175P0C221 793 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 GBP2P32456 591 aaPredicted RBP15.43■□□□□ 0.06
C9orf47-203ENST00000375851 ME3Q16798 604 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 BRD1O95696 1058 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 ZNF853P0CG23 659 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 MRPL12P52815 198 aaKnown RBP15.43■□□□□ 0.06
C9orf47-203ENST00000375851 SEC62Q99442 399 aaKnown RBP15.43■□□□□ 0.06
C9orf47-203ENST00000375851 PREX2Q70Z35 1606 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 NLRP1Q9C000 1473 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 BICDL2A1A5D9 508 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 KRT13P13646 458 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 GOPCQ9HD26 462 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 RNF216Q9NWF9 866 aaPredicted RBP15.43■□□□□ 0.06
C9orf47-203ENST00000375851 KRT40Q6A162 431 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 ZBTB38Q8NAP3 1195 aaPredicted RBP15.43■□□□□ 0.06
C9orf47-203ENST00000375851 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 LMBRD1Q9NUN5 540 aa15.43■□□□□ 0.06
C9orf47-203ENST00000375851 PUF60Q9UHX1 559 aaKnown RBP15.43■□□□□ 0.06
C9orf47-203ENST00000375851 GADD45BO75293 160 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-203ENST00000375851 PIK3AP1Q6ZUJ8 805 aa15.42■□□□□ 0.06
C9orf47-203ENST00000375851 COPRSQ9NQ92 184 aa15.42■□□□□ 0.06
C9orf47-203ENST00000375851 GOLGA6L7A0A1B0GV03 622 aa15.42■□□□□ 0.06
C9orf47-203ENST00000375851 LRRC24Q50LG9 513 aa15.42■□□□□ 0.06
C9orf47-203ENST00000375851 GTPBP4Q9BZE4 634 aaKnown RBP15.42■□□□□ 0.06
C9orf47-203ENST00000375851 PCCAP05165 728 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-203ENST00000375851 CLSTN2Q9H4D0 955 aa15.42■□□□□ 0.06
C9orf47-203ENST00000375851 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
C9orf47-203ENST00000375851 EIF6P56537 245 aaKnown RBP15.42■□□□□ 0.06
C9orf47-203ENST00000375851 UBXN1Q04323 297 aa15.42■□□□□ 0.06
C9orf47-203ENST00000375851 ZRSR2Q15696 482 aaKnown RBP15.42■□□□□ 0.06
C9orf47-203ENST00000375851 IFI16Q16666 785 aaKnown RBP15.42■□□□□ 0.06
C9orf47-203ENST00000375851 DYDC1Q8WWB3 177 aa15.42■□□□□ 0.06
C9orf47-203ENST00000375851 DRC1Q96MC2 740 aa15.42■□□□□ 0.06
C9orf47-203ENST00000375851 PPP2R5BQ15173 497 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 USP37Q86T82 979 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 TBC1D5Q92609 795 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 CCDC42Q96M95 316 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.41■□□□□ 0.06
C9orf47-203ENST00000375851 AKNAD1Q5T1N1 836 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 STAP2Q9UGK3 403 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 SSH2Q76I76 1423 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 BMS1Q14692 1282 aaKnown RBP15.41■□□□□ 0.06
C9orf47-203ENST00000375851 HS2ST1Q7LGA3 356 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 MPHOSPH6Q99547 160 aaKnown RBP15.41■□□□□ 0.06
C9orf47-203ENST00000375851 CTNNA2P26232 953 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 ARID5AQ03989 594 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 HAUS7Q99871 368 aa15.41■□□□□ 0.06
C9orf47-203ENST00000375851 CTAGE15A4D2H0 777 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 CTAGE8P0CG41 777 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 ZNF445P59923 1031 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 CTAGE6Q86UF2 777 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 CTAGE4Q8IX94 777 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 CUTAO60888 179 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 PLCD1P51178 756 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 GTF3C6Q969F1 213 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 POLR2DO15514 142 aaKnown RBP15.4■□□□□ 0.06
C9orf47-203ENST00000375851 FAM13AO94988 1023 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 TUBB4AP04350 444 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 USP21Q9UK80 565 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 LUC7L2Q9Y383 392 aaKnown RBP15.4■□□□□ 0.06
C9orf47-203ENST00000375851 CLASP1Q7Z460 1538 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 KRT83P78385 493 aa15.4■□□□□ 0.06
C9orf47-203ENST00000375851 TACC1O75410 805 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 HSPD1P10809 573 aaKnown RBP15.39■□□□□ 0.05
C9orf47-203ENST00000375851 PRDM10Q9NQV6 1147 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 BCCIPQ9P287 314 aaKnown RBP eCLIP15.39■□□□□ 0.05
C9orf47-203ENST00000375851 ASAP1Q9ULH1 1129 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 KRT86O43790 486 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 ZNF202O95125 648 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 CKAP4Q07065 602 aaKnown RBP15.39■□□□□ 0.05
C9orf47-203ENST00000375851 DPP8Q6V1X1 898 aaPredicted RBP15.39■□□□□ 0.05
C9orf47-203ENST00000375851 CERS3Q8IU89 383 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 SHTN1A0MZ66 631 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 SLU7O95391 586 aaKnown RBP15.39■□□□□ 0.05
C9orf47-203ENST00000375851 PDE6AP16499 860 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 POLD1P28340 1107 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 TTC38Q5R3I4 469 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 SV2BQ7L1I2 683 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 MAPKAPK5Q8IW41 473 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 KCNJ14Q9UNX9 436 aa15.39■□□□□ 0.05
C9orf47-203ENST00000375851 PRAMEF22A3QJZ6 481 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 NBPF14Q5TI25 921 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 TCHPQ9BT92 498 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 CARD10Q9BWT7 1032 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
C9orf47-203ENST00000375851 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
C9orf47-203ENST00000375851 ERBB3P21860 1342 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms