RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 HOOK2Q96ED9 719 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 PRPF4BQ13523 1007 aaKnown RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 PALM2Q8IXS6 379 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 MYL5Q02045 173 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 UBLCP1Q8WVY7 318 aaPredicted RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 MRPS27Q92552 414 aaKnown RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 COG3Q96JB2 828 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 IBTKQ9P2D0 1353 aaPredicted RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 RASGRF2O14827 1237 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 RAB17Q9H0T7 212 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 USP47Q96K76 1375 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 DIAPH2O60879 1101 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 SYF2O95926 243 aaKnown RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 VPS41P49754 854 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 SUGP1Q8IWZ8 645 aaKnown RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 GIMAP4Q9NUV9 329 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 NUP155O75694 1391 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 TLDC2A0PJX2 215 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 TARSL2A2RTX5 802 aaKnown RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 MAPK13O15264 365 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 C8orf34Q49A92 452 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 FGD4Q96M96 766 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 WWC3Q9ULE0 1092 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 EMBQ6PCB8 327 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 CXorf38Q8TB03 319 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 TBC1D23Q9NUY8 699 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 CDC23Q9UJX2 597 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 CCDC159P0C7I6 412 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 UBL4BQ8N7F7 174 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 ZNF215Q9UL58 517 aaPredicted RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 E9PMD0 336 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 PPP2R1AP30153 589 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 HHATQ5VTY9 493 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 CNGB3Q9NQW8 809 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 RNF216Q9NWF9 866 aaPredicted RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 HPDP32754 393 aaPredicted RBP7.37□□□□□ -1.23
UBR4-204ENST00000375254 IL9RQ01113 521 aa7.37□□□□□ -1.23
UBR4-204ENST00000375254 SKOR1P84550 965 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 KRT5P13647 590 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 LAMB3Q13751 1172 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 PDXDC1Q6P996 788 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 SRGAP1Q7Z6B7 1085 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 PFDN4Q9NQP4 134 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 KRT8P05787 483 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 PNMA6AP0CW24 399 aaPredicted RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 CATSPER2Q96P56 530 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 C4BPBP20851 252 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 NUDCD3Q8IVD9 361 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.36□□□□□ -1.233e-6■■■□□ 15.6
UBR4-204ENST00000375254 GJB2P29033 226 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 RNF41Q9H4P4 317 aaPredicted RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 FAM169AQ9Y6X4 670 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 TTC41PQ6P2S7 1318 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 PHEXP78562 749 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 ADRM1Q16186 407 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 CATSPER1Q8NEC5 780 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 ZCRB1Q8TBF4 217 aaKnown RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 LZTFL1Q9NQ48 299 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 UBXN1Q04323 297 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 SSRP1Q08945 709 aaKnown RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 NDUFA5Q16718 116 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 VIPAS39Q9H9C1 493 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 DDX21Q9NR30 783 aaKnown RBP eCLIP7.36□□□□□ -1.23
UBR4-204ENST00000375254 GABPB2Q8TAK5 448 aaPredicted RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 TXNDC16Q9P2K2 825 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 ZMYM3Q14202 1370 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 LRRIQ3A6PVS8 624 aaPredicted RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 F13A1P00488 732 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 UBA7P41226 1012 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 MRPS35P82673 323 aaKnown RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 SND1Q7KZF4 910 aaKnown RBP eCLIP7.36□□□□□ -1.23
UBR4-204ENST00000375254 PDP2Q9P2J9 529 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 HDGFL1Q5TGJ6 251 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 RPS6KA1Q15418 735 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 XAB2Q9HCS7 855 aaKnown RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 ETAA1Q9NY74 926 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 PDE6CP51160 858 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 CACTINQ8WUQ7 758 aaKnown RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 GMNCA6NCL1 334 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 FAM160A1Q05DH4 1040 aa7.36□□□□□ -1.23
UBR4-204ENST00000375254 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.36□□□□□ -1.23
UBR4-204ENST00000375254 STX10O60499 249 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 PPP4R1Q8TF05 950 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 HAUS4Q9H6D7 363 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 XPO1O14980 1071 aaKnown RBP7.35□□□□□ -1.23
UBR4-204ENST00000375254 OR8K1Q8NGG5 319 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 RCSD1Q6JBY9 416 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 GAS2L2Q8NHY3 880 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 SCHIP1Q9P0W5 487 aaPredicted RBP7.35□□□□□ -1.23
UBR4-204ENST00000375254 TTC21AQ8NDW8 1320 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 STRNO43815 780 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 BAG2O95816 211 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 TDRD12Q587J7 1177 aaKnown RBP7.35□□□□□ -1.23
UBR4-204ENST00000375254 LRRC8BQ6P9F7 803 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 RSPH3Q86UC2 560 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 CALR3Q96L12 384 aaKnown RBP7.35□□□□□ -1.23
UBR4-204ENST00000375254 SOX12O15370 315 aa7.35□□□□□ -1.23
UBR4-204ENST00000375254 EEF1DP29692 281 aaKnown RBP7.35□□□□□ -1.23
UBR4-204ENST00000375254 STX3Q13277 289 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms