RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ITGA6P23229 1130 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 TNNI3KQ59H18 835 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 SCLT1Q96NL6 688 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 KAT14Q9H8E8 782 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 FPGT-TNNI3KV9GXZ4 949 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 NEURL4Q96JN8 1562 aa13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 HELBQ8NG08 1087 aaPredicted RBP13.92□□□□□ -0.18
NPLOC4-202ENST00000374747 KCNQ3O43525 872 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 CCDC121Q6ZUS5 278 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 OTUD7AQ8TE49 926 aaPredicted RBP13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 FERMT2Q96AC1 680 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 FEZ1Q99689 392 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 AFMP43652 599 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 KRT83P78385 493 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 WTAPQ15007 396 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 KIF2CQ99661 725 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 OGFRQ9NZT2 677 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 FERP16591 822 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 DRC1Q96MC2 740 aa13.91□□□□□ -0.18
NPLOC4-202ENST00000374747 KDRP35968 1356 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 KRT86O43790 486 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 TUBBP07437 444 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 TTC31Q49AM3 519 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 SYCP3Q8IZU3 236 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 CCDC77Q9BR77 488 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 ERBB3P21860 1342 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 PNMA6EA0A0J9YXQ4 647 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 A0A1B0GUL7 405 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 PRPHP41219 470 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 TBC1D5Q92609 795 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 TSNARE1Q96NA8 513 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 VPS18Q9P253 973 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 AGLP35573 1532 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 NEURL1BA8MQ27 555 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 OTUD6BQ8N6M0 293 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 TTC14Q96N46 770 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 HELLSQ9NRZ9 838 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 PNPLA6Q8IY17 1366 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 COL3A1P02461 1466 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 PTPRMP28827 1452 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 MAGEB6P1A0A0J9YX57 407 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 PSMA7O14818 248 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 STAT6P42226 847 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 CCDC129Q6ZRS4 1044 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
NPLOC4-202ENST00000374747 ZBTB43O43298 467 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 FERMT1Q9BQL6 677 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 TBCAO75347 108 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 USP26Q9BXU7 913 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 ZC3H12CQ9C0D7 883 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 IQCGQ9H095 443 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 PTGS1P23219 599 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 NSFL1CQ9UNZ2 370 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 ADGRL3Q9HAR2 1447 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 LMOD1P29536 600 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 CREB3L3Q68CJ9 461 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 ARFGAP2Q8N6H7 521 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 CABP5Q9NP86 173 aa13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 RBM17Q96I25 401 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-202ENST00000374747 USP44Q9H0E7 712 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 PLCG2P16885 1265 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 MXRA7P84157 204 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 DENND2AQ9ULE3 1009 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 ZNF853P0CG23 659 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 TIMM10P62072 90 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 Q6ZUG5 572 aa13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 SREK1Q8WXA9 508 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 PAIP2Q9BPZ3 127 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-202ENST00000374747 CCDC174Q6PII3 467 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 GAS2L3Q86XJ1 694 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 MAGEB6Q8N7X4 407 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 EYA3Q99504 573 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 DBNDD2Q9BQY9 259 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 SPTLC2O15270 562 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 SYT10Q6XYQ8 523 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 SSH3Q8TE77 659 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 TCEANC2Q96MN5 208 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 LMBR1Q8WVP7 490 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 VAT1LQ9HCJ6 419 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 COMMD10Q9Y6G5 202 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 MARCKSP29966 332 aaPredicted RBP13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 KLHDC4Q8TBB5 520 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 LRRC2Q9BYS8 371 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 HDAC9Q9UKV0 1011 aa13.87□□□□□ -0.19
NPLOC4-202ENST00000374747 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms