RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 ANO3Q9BYT9 981 aa16.3■□□□□ 0.2
SNX30-201ENST00000374232 SLC52A1Q9NWF4 448 aa16.3■□□□□ 0.2
SNX30-201ENST00000374232 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
SNX30-201ENST00000374232 TIMM10P62072 90 aa16.3■□□□□ 0.2
SNX30-201ENST00000374232 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 DDX12PQ92771 950 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
SNX30-201ENST00000374232 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 IVLP07476 585 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 TCP10Q12799 353 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
SNX30-201ENST00000374232 PHKBQ93100 1093 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 PYM1Q9BRP8 204 aaKnown RBP16.29■□□□□ 0.2
SNX30-201ENST00000374232 ZKSCAN5Q9Y2L8 839 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 TXKP42681 527 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 RIOK3O14730 519 aaKnown RBP16.29■□□□□ 0.2
SNX30-201ENST00000374232 GADD45BO75293 160 aaPredicted RBP16.29■□□□□ 0.2
SNX30-201ENST00000374232 PCK1P35558 622 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 CASC4Q6P4E1 433 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
SNX30-201ENST00000374232 SPOUT1Q5T280 376 aaKnown RBP16.28■□□□□ 0.2
SNX30-201ENST00000374232 UHMK1Q8TAS1 419 aaKnown RBP16.28■□□□□ 0.2
SNX30-201ENST00000374232 DDX17Q92841 729 aaKnown RBP16.28■□□□□ 0.2
SNX30-201ENST00000374232 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 CUL4BQ13620 913 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 STMN2Q93045 179 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 KRT83P78385 493 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 PDE4DQ08499 809 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 BUB1BO60566 1050 aaPredicted RBP16.28■□□□□ 0.2
SNX30-201ENST00000374232 KIF22Q14807 665 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 GBP6Q6ZN66 633 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 RUFY3Q7L099 469 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
SNX30-201ENST00000374232 TAF5LO75529 589 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
SNX30-201ENST00000374232 FRMD4BQ9Y2L6 1034 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 INF2Q27J81 1249 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 RRAGDQ9NQL2 400 aaPredicted RBP16.27■□□□□ 0.2
SNX30-201ENST00000374232 TFCP2L1Q9NZI6 479 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.2
SNX30-201ENST00000374232 MBD4O95243 580 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 TBC1D10BQ4KMP7 808 aaPredicted RBP16.27■□□□□ 0.2
SNX30-201ENST00000374232 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 NCAPH2Q6IBW4 605 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 TBC1D31Q96DN5 1066 aa16.27■□□□□ 0.2
SNX30-201ENST00000374232 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
SNX30-201ENST00000374232 IRX3P78415 501 aaPredicted RBP16.27■□□□□ 0.2
SNX30-201ENST00000374232 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.2
SNX30-201ENST00000374232 MRPL50Q8N5N7 158 aaKnown RBP16.27■□□□□ 0.19
SNX30-201ENST00000374232 LUC7L2Q9Y383 392 aaKnown RBP16.27■□□□□ 0.19
SNX30-201ENST00000374232 AKR1B15C9JRZ8 316 aaPredicted RBP16.27■□□□□ 0.19
SNX30-201ENST00000374232 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.19
SNX30-201ENST00000374232 CCDC110Q8TBZ0 833 aa16.27■□□□□ 0.19
SNX30-201ENST00000374232 CCDC94Q9BW85 323 aaPredicted RBP16.27■□□□□ 0.19
SNX30-201ENST00000374232 GTPBP4Q9BZE4 634 aaKnown RBP16.27■□□□□ 0.19
SNX30-201ENST00000374232 NOP9Q86U38 636 aaKnown RBP16.26■□□□□ 0.19
SNX30-201ENST00000374232 ANKRD42Q8N9B4 389 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 MAGED2Q9UNF1 606 aaPredicted RBP16.26■□□□□ 0.19
SNX30-201ENST00000374232 GUCY2FP51841 1108 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 TACC3Q9Y6A5 838 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 ATP2A2P16615 1042 aaKnown RBP16.26■□□□□ 0.19
SNX30-201ENST00000374232 IFRD2Q12894 506 aaPredicted RBP16.26■□□□□ 0.19
SNX30-201ENST00000374232 UQCRFS1P1P0C7P4 283 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 SETDB1Q15047 1291 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 FNBP1Q96RU3 617 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 KRT19P08727 400 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 SEPT6Q14141 434 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 TRIM68Q6AZZ1 485 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 FEZ2Q9UHY8 353 aaPredicted RBP16.26■□□□□ 0.19
SNX30-201ENST00000374232 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 MIPOL1Q8TD10 442 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNX30-201ENST00000374232 TAB2Q9NYJ8 693 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 CAMSAP2Q08AD1 1489 aa16.26■□□□□ 0.19
SNX30-201ENST00000374232 DCLK2Q8N568 766 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 DDX21Q9NR30 783 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNX30-201ENST00000374232 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 PRPHP41219 470 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 ZCRB1Q8TBF4 217 aaKnown RBP16.25■□□□□ 0.19
SNX30-201ENST00000374232 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.25■□□□□ 0.19
SNX30-201ENST00000374232 RFC1P35251 1148 aaPredicted RBP16.25■□□□□ 0.19
SNX30-201ENST00000374232 VAV2P52735 878 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 AFAP1L1Q8TED9 768 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 EEF2KMTQ96G04 330 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
SNX30-201ENST00000374232 TNFAIP3P21580 790 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 ARHGAP44Q17R89 818 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 ZNF804AQ7Z570 1209 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 FAM89AQ96GI7 184 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 KCNJ14Q9UNX9 436 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 STMN4Q9H169 189 aaPredicted RBP16.25■□□□□ 0.19
SNX30-201ENST00000374232 NOS1P29475 1434 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 NESP48681 1621 aa16.25■□□□□ 0.19
SNX30-201ENST00000374232 CEP120Q8N960 986 aa16.24■□□□□ 0.19
SNX30-201ENST00000374232 FAM227BQ96M60 508 aa16.24■□□□□ 0.19
SNX30-201ENST00000374232 CHAMP1Q96JM3 812 aa16.24■□□□□ 0.19
SNX30-201ENST00000374232 AATFQ9NY61 560 aaKnown RBP eCLIP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms