RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ERO1BQ86YB8 467 aa15.95■□□□□ 0.14
HDAC8-204ENST00000373560 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
HDAC8-204ENST00000373560 PHAXQ9H814 394 aaKnown RBP15.95■□□□□ 0.14
HDAC8-204ENST00000373560 LEMD3Q9Y2U8 911 aa15.95■□□□□ 0.14
HDAC8-204ENST00000373560 FLT3LGP49771 235 aa15.94■□□□□ 0.14
HDAC8-204ENST00000373560 FCGRTP55899 365 aa15.94■□□□□ 0.14
HDAC8-204ENST00000373560 MDM2Q00987 491 aaPredicted RBP15.94■□□□□ 0.14
HDAC8-204ENST00000373560 PPIL2Q13356 520 aa15.94■□□□□ 0.14
HDAC8-204ENST00000373560 FAM122AQ96E09 287 aa15.94■□□□□ 0.14
HDAC8-204ENST00000373560 WRNIP1Q96S55 665 aa15.94■□□□□ 0.14
HDAC8-204ENST00000373560 CYP2C8P10632 490 aa15.93■□□□□ 0.14
HDAC8-204ENST00000373560 CACNB3P54284 484 aa15.93■□□□□ 0.14
HDAC8-204ENST00000373560 RIC3Q7Z5B4 369 aa15.93■□□□□ 0.14
HDAC8-204ENST00000373560 ANKRD23Q86SG2 305 aa15.93■□□□□ 0.14
HDAC8-204ENST00000373560 HELBQ8NG08 1087 aaPredicted RBP15.93■□□□□ 0.14
HDAC8-204ENST00000373560 MYLIPQ8WY64 445 aa15.93■□□□□ 0.14
HDAC8-204ENST00000373560 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDAC8-204ENST00000373560 PFASO15067 1338 aa15.93■□□□□ 0.14
HDAC8-204ENST00000373560 MAST2Q6P0Q8 1798 aa15.92■□□□□ 0.14
HDAC8-204ENST00000373560 LTBP2Q14767 1821 aa15.92■□□□□ 0.14
HDAC8-204ENST00000373560 TMEM265A0A087WTH1 108 aa15.92■□□□□ 0.14
HDAC8-204ENST00000373560 NEFMP07197 916 aa15.92■□□□□ 0.14
HDAC8-204ENST00000373560 CCDC191Q8NCU4 936 aa15.92■□□□□ 0.14
HDAC8-204ENST00000373560 CWC25Q9NXE8 425 aaPredicted RBP15.92■□□□□ 0.14
HDAC8-204ENST00000373560 DBF4Q9UBU7 674 aaPredicted RBP15.92■□□□□ 0.14
HDAC8-204ENST00000373560 TNFRSF10AO00220 468 aa15.91■□□□□ 0.14
HDAC8-204ENST00000373560 CHRM1P11229 460 aaPredicted RBP15.91■□□□□ 0.14
HDAC8-204ENST00000373560 TRIM32Q13049 653 aa15.91■□□□□ 0.14
HDAC8-204ENST00000373560 TNFAIP1Q13829 316 aa15.91■□□□□ 0.14
HDAC8-204ENST00000373560 BABAM1Q9NWV8 329 aa15.91■□□□□ 0.14
HDAC8-204ENST00000373560 FAM205AQ6ZU69 1335 aa15.91■□□□□ 0.14
HDAC8-204ENST00000373560 INPP5BP32019 993 aa15.9■□□□□ 0.14
HDAC8-204ENST00000373560 RIPK4P57078 832 aa15.9■□□□□ 0.14
HDAC8-204ENST00000373560 ZNF697Q5TEC3 545 aa15.9■□□□□ 0.14
HDAC8-204ENST00000373560 USP38Q8NB14 1042 aa15.9■□□□□ 0.14
HDAC8-204ENST00000373560 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
HDAC8-204ENST00000373560 TAOK2Q9UL54 1235 aa15.9■□□□□ 0.14
HDAC8-204ENST00000373560 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
HDAC8-204ENST00000373560 AK9Q5TCS8 1911 aa15.9■□□□□ 0.14
HDAC8-204ENST00000373560 PLXNB2O15031 1838 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 TAF5LO75529 589 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 HSP90B1P14625 803 aaKnown RBP15.89■□□□□ 0.13
HDAC8-204ENST00000373560 IL1R1P14778 569 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 CHRNDQ07001 517 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 GRIK5Q16478 980 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 GPAT2Q6NUI2 795 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 PXYLP1Q8TE99 480 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 C11orf49Q9H6J7 331 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 PCDHB8Q9UN66 801 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 PTPRFP10586 1907 aa15.89■□□□□ 0.13
HDAC8-204ENST00000373560 CHL1O00533 1208 aa15.88■□□□□ 0.13
HDAC8-204ENST00000373560 GOLGA2Q08379 1002 aa15.88■□□□□ 0.13
HDAC8-204ENST00000373560 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
HDAC8-204ENST00000373560 NBPF3Q9H094 633 aa15.88■□□□□ 0.13
HDAC8-204ENST00000373560 TTYH1Q9H313 450 aaPredicted RBP15.88■□□□□ 0.13
HDAC8-204ENST00000373560 LAS1LQ9Y4W2 734 aaKnown RBP15.88■□□□□ 0.13
HDAC8-204ENST00000373560 FRMPD3Q5JV73 1810 aa15.87■□□□□ 0.13
HDAC8-204ENST00000373560 IGKV5-2P06315 115 aa15.87■□□□□ 0.13
HDAC8-204ENST00000373560 KCNJ4P48050 445 aa15.87■□□□□ 0.13
HDAC8-204ENST00000373560 FKBP1AP62942 108 aaKnown RBP15.87■□□□□ 0.13
HDAC8-204ENST00000373560 IRF5Q13568 498 aa15.87■□□□□ 0.13
HDAC8-204ENST00000373560 ANKLE1Q8NAG6 615 aa15.87■□□□□ 0.13
HDAC8-204ENST00000373560 SYMPKQ92797 1274 aaKnown RBP15.87■□□□□ 0.13
HDAC8-204ENST00000373560 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
HDAC8-204ENST00000373560 KCNH4Q9UQ05 1017 aa15.87■□□□□ 0.13
HDAC8-204ENST00000373560 IGHMBP2P38935 993 aaKnown RBP15.86■□□□□ 0.13
HDAC8-204ENST00000373560 PPATQ06203 517 aa15.86■□□□□ 0.13
HDAC8-204ENST00000373560 MAP3K12Q12852 859 aa15.86■□□□□ 0.13
HDAC8-204ENST00000373560 LRRC26Q2I0M4 334 aa15.86■□□□□ 0.13
HDAC8-204ENST00000373560 DCBLD2Q96PD2 775 aa15.86■□□□□ 0.13
HDAC8-204ENST00000373560 PARK7Q99497 189 aaKnown RBP15.86■□□□□ 0.13
HDAC8-204ENST00000373560 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
HDAC8-204ENST00000373560 ANKRD2Q9GZV1 360 aa15.86■□□□□ 0.13
HDAC8-204ENST00000373560 TTF2Q9UNY4 1162 aaKnown RBP15.86■□□□□ 0.13
HDAC8-204ENST00000373560 DNAH12Q6ZR08 3092 aa15.86■□□□□ 0.13
HDAC8-204ENST00000373560 ITGA6P23229 1130 aa15.85■□□□□ 0.13
HDAC8-204ENST00000373560 DUSP27Q5VZP5 1158 aa15.85■□□□□ 0.13
HDAC8-204ENST00000373560 C15orf52Q6ZUT6 534 aaKnown RBP15.85■□□□□ 0.13
HDAC8-204ENST00000373560 ZNF467Q7Z7K2 595 aaPredicted RBP15.85■□□□□ 0.13
HDAC8-204ENST00000373560 SERPINA10Q9UK55 444 aa15.85■□□□□ 0.13
HDAC8-204ENST00000373560 TNPO2O14787 897 aaKnown RBP15.84■□□□□ 0.13
HDAC8-204ENST00000373560 HOXB7P09629 217 aa15.84■□□□□ 0.13
HDAC8-204ENST00000373560 CRKP46108 304 aa15.84■□□□□ 0.13
HDAC8-204ENST00000373560 TJAP1Q5JTD0 557 aa15.84■□□□□ 0.13
HDAC8-204ENST00000373560 MIGA2Q7L4E1 593 aa15.84■□□□□ 0.13
HDAC8-204ENST00000373560 PHIPQ8WWQ0 1821 aa15.84■□□□□ 0.13
HDAC8-204ENST00000373560 FOSL2P15408 326 aa15.83■□□□□ 0.12
HDAC8-204ENST00000373560 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
HDAC8-204ENST00000373560 TNNI2P48788 182 aa15.83■□□□□ 0.12
HDAC8-204ENST00000373560 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
HDAC8-204ENST00000373560 MFSD14BQ5SR56 506 aa15.83■□□□□ 0.12
HDAC8-204ENST00000373560 COL6A1P12109 1028 aa15.82■□□□□ 0.12
HDAC8-204ENST00000373560 CAPN2P17655 700 aa15.82■□□□□ 0.12
HDAC8-204ENST00000373560 ZNF804AQ7Z570 1209 aa15.82■□□□□ 0.12
HDAC8-204ENST00000373560 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
HDAC8-204ENST00000373560 C9orf50Q5SZB4 431 aa15.81■□□□□ 0.12
HDAC8-204ENST00000373560 UBE3BQ7Z3V4 1068 aa15.81■□□□□ 0.12
HDAC8-204ENST00000373560 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
HDAC8-204ENST00000373560 TRPC6Q9Y210 931 aa15.81■□□□□ 0.12
HDAC8-204ENST00000373560 MAP3K2Q9Y2U5 619 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms