RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 F8W031 263 aaPredicted RBP12.36□□□□□ -0.43
CSMD2-204ENST00000373380 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
CSMD2-204ENST00000373380 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
CSMD2-204ENST00000373380 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
CSMD2-204ENST00000373380 BAG1Q99933 345 aaPredicted RBP12.36□□□□□ -0.43
CSMD2-204ENST00000373380 MAPK8IP1Q9UQF2 711 aa12.36□□□□□ -0.43
CSMD2-204ENST00000373380 ZNF202O95125 648 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 NAPAP54920 295 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 LRMPQ12912 555 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 TM6SF1Q9BZW5 370 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 KCNH3Q9ULD8 1083 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 ANGEL1Q9UNK9 670 aaKnown RBP12.35□□□□□ -0.43
CSMD2-204ENST00000373380 MTMR6Q9Y217 621 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 ELP1O95163 1332 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 UBXN1Q04323 297 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 EHBP1Q8NDI1 1231 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 C19orf44Q9H6X5 657 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 TPCN1Q9ULQ1 816 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
CSMD2-204ENST00000373380 PLEKHG3A1L390 1219 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 EVCP57679 992 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 FANCCQ00597 558 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 SLF2Q8IX21 1173 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 LLPHQ9BRT6 129 aaKnown RBP12.35□□□□□ -0.43
CSMD2-204ENST00000373380 RSPH14Q9UHP6 348 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 PIK3C2BO00750 1634 aa12.35□□□□□ -0.43
CSMD2-204ENST00000373380 FSD2A1L4K1 749 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 DIS3L2Q8IYB7 885 aaKnown RBP12.34□□□□□ -0.43
CSMD2-204ENST00000373380 IQUBQ8NA54 791 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 APPBP2Q92624 585 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 CCDC42Q96M95 316 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
CSMD2-204ENST00000373380 CUL5Q93034 780 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 NR1I2O75469 434 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 CAPN2P17655 700 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 ITGA6P23229 1130 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 KRT2P35908 639 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 KIF5AQ12840 1032 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 ADCK5Q3MIX3 580 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 SMAP1Q8IYB5 467 aaPredicted RBP12.34□□□□□ -0.43
CSMD2-204ENST00000373380 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
CSMD2-204ENST00000373380 GNAQP50148 359 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 MAP2K1Q02750 393 aaPredicted RBP12.34□□□□□ -0.43
CSMD2-204ENST00000373380 VPS16Q9H269 839 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
CSMD2-204ENST00000373380 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
CSMD2-204ENST00000373380 TMEM2Q9UHN6 1383 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 TUBB4AP04350 444 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 ELF2Q15723 593 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.33□□□□□ -0.44
CSMD2-204ENST00000373380 C10orf67Q8IYJ2 551 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 GIGYF1O75420 1035 aaPredicted RBP12.33□□□□□ -0.44
CSMD2-204ENST00000373380 ERO1AQ96HE7 468 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 SETDB2Q96T68 719 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 CARD6Q9BX69 1037 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 KRT86O43790 486 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 GNAT2P19087 354 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 RFC4P35249 363 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 TNIP1Q15025 636 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 CEP112Q8N8E3 955 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 FEZ1Q99689 392 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 OGFRQ9NZT2 677 aa12.33□□□□□ -0.44
CSMD2-204ENST00000373380 V9GY48 417 aaPredicted RBP12.33□□□□□ -0.44
CSMD2-204ENST00000373380 CALML3P27482 149 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 CETN2P41208 172 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 ZAP70P43403 619 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 RILPL1Q5EBL4 403 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 STAMQ92783 540 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 hCG_1642624A0A1W2PR95 340 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 TACC1O75410 805 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 CKAP4Q07065 602 aaKnown RBP12.32□□□□□ -0.44
CSMD2-204ENST00000373380 PICALMQ13492 652 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 KRT40Q6A162 431 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 SYCP3Q8IZU3 236 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 IGSF22Q8N9C0 903 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 SLC52A2Q9HAB3 445 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 NFE2L3Q9Y4A8 694 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 AKR1B15C9JRZ8 316 aaPredicted RBP12.32□□□□□ -0.44
CSMD2-204ENST00000373380 E7EWF7 191 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 TAF5LO75529 589 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 ATP5JP18859 108 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 PPP2R3AQ06190 1150 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 BEND3Q5T5X7 828 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 DTHD1Q6ZMT9 781 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.44
CSMD2-204ENST00000373380 VPS18Q9P253 973 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 IFT172Q9UG01 1749 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 NEURL1BA8MQ27 555 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 ATP2C2O75185 946 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 CETN1Q12798 172 aa12.32□□□□□ -0.44
CSMD2-204ENST00000373380 DNAJC21Q5F1R6 531 aaKnown RBP12.32□□□□□ -0.44
CSMD2-204ENST00000373380 NSFL1CQ9UNZ2 370 aaKnown RBP12.32□□□□□ -0.44
CSMD2-204ENST00000373380 SAMM50Q9Y512 469 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms