RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 RANBP6O60518 1105 aaKnown RBP27.75■■■□□ 2.03
CDK9-201ENST00000373264 NTSR2O95665 410 aa27.75■■■□□ 2.03
CDK9-201ENST00000373264 MARCKSP29966 332 aaPredicted RBP27.75■■■□□ 2.03
CDK9-201ENST00000373264 TERF1P54274 439 aa27.75■■■□□ 2.03
CDK9-201ENST00000373264 HSP90AA2PQ14568 343 aaPredicted RBP27.75■■■□□ 2.03
CDK9-201ENST00000373264 CCDC144BQ3MJ40 725 aa27.75■■■□□ 2.03
CDK9-201ENST00000373264 ALG1Q9BT22 464 aa27.75■■■□□ 2.03
CDK9-201ENST00000373264 LY9Q9HBG7 655 aa27.75■■■□□ 2.03
CDK9-201ENST00000373264 SPTLC3Q9NUV7 552 aa27.75■■■□□ 2.03
CDK9-201ENST00000373264 ATL3Q6DD88 541 aa27.75■■■□□ 2.03
CDK9-201ENST00000373264 ADALQ6DHV7 355 aa27.75■■■□□ 2.03
CDK9-201ENST00000373264 FAM217BQ9NTX9 383 aaPredicted RBP27.75■■■□□ 2.03
CDK9-201ENST00000373264 WNK3Q9BYP7 1800 aa27.74■■■□□ 2.03
CDK9-201ENST00000373264 GSG1L2A8MUP6 293 aa27.74■■■□□ 2.03
CDK9-201ENST00000373264 RRP12Q5JTH9 1297 aaKnown RBP27.74■■■□□ 2.03
CDK9-201ENST00000373264 NFXL1Q6ZNB6 911 aa27.74■■■□□ 2.03
CDK9-201ENST00000373264 NAPBQ9H115 298 aa27.74■■■□□ 2.03
CDK9-201ENST00000373264 SPTLC2O15270 562 aa27.74■■■□□ 2.03
CDK9-201ENST00000373264 STX1AQ16623 288 aa27.74■■■□□ 2.03
CDK9-201ENST00000373264 FAM13BQ9NYF5 915 aa27.74■■■□□ 2.03
CDK9-201ENST00000373264 PATL2C9JE40 543 aaKnown RBP27.73■■■□□ 2.03
CDK9-201ENST00000373264 MAP3K12Q12852 859 aa27.73■■■□□ 2.03
CDK9-201ENST00000373264 TMEM67Q5HYA8 995 aa27.73■■■□□ 2.03
CDK9-201ENST00000373264 ADGRA1Q86SQ6 560 aa27.73■■■□□ 2.03
CDK9-201ENST00000373264 DHX40Q8IX18 779 aaKnown RBP27.73■■■□□ 2.03
CDK9-201ENST00000373264 WDR19Q8NEZ3 1342 aa27.73■■■□□ 2.03
CDK9-201ENST00000373264 TAF1P21675 1872 aa27.73■■■□□ 2.03
CDK9-201ENST00000373264 WDHD1O75717 1129 aaPredicted RBP27.73■■■□□ 2.03
CDK9-201ENST00000373264 CHRNDQ07001 517 aa27.73■■■□□ 2.03
CDK9-201ENST00000373264 ARID5BQ14865 1188 aa27.73■■■□□ 2.03
CDK9-201ENST00000373264 SDF4Q9BRK5 362 aa27.73■■■□□ 2.03
CDK9-201ENST00000373264 POLR3EQ9NVU0 708 aa27.72■■■□□ 2.03
CDK9-201ENST00000373264 MROH7-TTC4A0A0A0MT08 1334 aa27.72■■■□□ 2.03
CDK9-201ENST00000373264 NTRK3Q16288 839 aa27.72■■■□□ 2.03
CDK9-201ENST00000373264 KRT40Q6A162 431 aa27.72■■■□□ 2.03
CDK9-201ENST00000373264 CMTR1Q8N1G2 835 aaKnown RBP27.72■■■□□ 2.03
CDK9-201ENST00000373264 ANO1Q5XXA6 986 aa27.71■■■□□ 2.03
CDK9-201ENST00000373264 TOMM22Q9NS69 142 aa27.71■■■□□ 2.03
CDK9-201ENST00000373264 ARAP2Q8WZ64 1704 aa27.71■■■□□ 2.03
CDK9-201ENST00000373264 GOLGA6L6A8MZA4 724 aa27.7■■■□□ 2.03
CDK9-201ENST00000373264 BIN1O00499 593 aa27.7■■■□□ 2.03
CDK9-201ENST00000373264 CTAGE5O15320 804 aa27.7■■■□□ 2.03
CDK9-201ENST00000373264 ZBTB43O43298 467 aa27.7■■■□□ 2.03
CDK9-201ENST00000373264 CCDC152Q4G0S7 254 aa27.7■■■□□ 2.03
CDK9-201ENST00000373264 VPS37DQ86XT2 251 aa27.7■■■□□ 2.03
CDK9-201ENST00000373264 CLIP2Q9UDT6 1046 aa27.7■■■□□ 2.03
CDK9-201ENST00000373264 AXDND1Q5T1B0 1012 aaPredicted RBP27.7■■■□□ 2.02
CDK9-201ENST00000373264 SYNE3Q6ZMZ3 975 aa27.7■■■□□ 2.02
CDK9-201ENST00000373264 CCDC82Q8N4S0 544 aa27.7■■■□□ 2.02
CDK9-201ENST00000373264 CHMP4CQ96CF2 233 aa27.7■■■□□ 2.02
CDK9-201ENST00000373264 SLC4A4Q9Y6R1 1079 aa27.7■■■□□ 2.02
CDK9-201ENST00000373264 PHLPP1O60346 1717 aa27.7■■■□□ 2.02
CDK9-201ENST00000373264 GOLGA8AA7E2F4 631 aa27.69■■■□□ 2.02
CDK9-201ENST00000373264 GOLGA6L19H0YKK7 550 aa27.69■■■□□ 2.02
CDK9-201ENST00000373264 IFIT3O14879 490 aaKnown RBP27.69■■■□□ 2.02
CDK9-201ENST00000373264 GUCY1A2P33402 732 aa27.69■■■□□ 2.02
CDK9-201ENST00000373264 IGHMBP2P38935 993 aaKnown RBP27.69■■■□□ 2.02
CDK9-201ENST00000373264 AOPEPQ8N6M6 819 aa27.69■■■□□ 2.02
CDK9-201ENST00000373264 GYG1P46976 350 aa27.69■■■□□ 2.02
CDK9-201ENST00000373264 DPCR1Q3MIW9 517 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 ISM2Q6H9L7 571 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 PTF1AQ7RTS3 328 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 BRAPQ7Z569 592 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 CACTINQ8WUQ7 758 aaKnown RBP27.68■■■□□ 2.02
CDK9-201ENST00000373264 BICDL1Q6ZP65 573 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 KCNG4Q8TDN1 519 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 SDR42E1Q8WUS8 393 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 AK7Q96M32 723 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 LRP2BPQ9P2M1 347 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 ECM29Q5VYK3 1845 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 DOCK2Q92608 1830 aa27.68■■■□□ 2.02
CDK9-201ENST00000373264 A0A1W2PQ27 194 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 A0A1W2PQ64 194 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 A0A1W2PQD8 194 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 YEATS4O95619 227 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 TDO2P48775 406 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 ALX1Q15699 326 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 ABCF2Q9UG63 623 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 ERFEQ4G0M1 354 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 SLC26A6Q9BXS9 759 aa27.67■■■□□ 2.02
CDK9-201ENST00000373264 PFKFB1P16118 471 aa27.66■■■□□ 2.02
CDK9-201ENST00000373264 AKNAD1Q5T1N1 836 aa27.66■■■□□ 2.02
CDK9-201ENST00000373264 TMEM87BQ96K49 555 aa27.66■■■□□ 2.02
CDK9-201ENST00000373264 COL22A1Q8NFW1 1626 aaPredicted RBP27.66■■■□□ 2.02
CDK9-201ENST00000373264 BECN2A8MW95 431 aa27.66■■■□□ 2.02
CDK9-201ENST00000373264 ZNF202O95125 648 aa27.66■■■□□ 2.02
CDK9-201ENST00000373264 RRP9O43818 475 aaKnown RBP27.65■■■□□ 2.02
CDK9-201ENST00000373264 IARSP41252 1262 aaKnown RBP27.65■■■□□ 2.02
CDK9-201ENST00000373264 PARP10Q53GL7 1025 aa27.65■■■□□ 2.02
CDK9-201ENST00000373264 CLIC6Q96NY7 704 aa27.65■■■□□ 2.02
CDK9-201ENST00000373264 ANO10Q9NW15 660 aa27.65■■■□□ 2.02
CDK9-201ENST00000373264 SLC12A7Q9Y666 1083 aa27.65■■■□□ 2.02
CDK9-201ENST00000373264 CHD4Q14839 1912 aa27.65■■■□□ 2.02
CDK9-201ENST00000373264 MFSD6Q6ZSS7 791 aa27.65■■■□□ 2.02
CDK9-201ENST00000373264 SGMS1Q86VZ5 419 aa27.65■■■□□ 2.02
CDK9-201ENST00000373264 TPM3P06753 285 aa27.64■■■□□ 2.01
CDK9-201ENST00000373264 CCDC24Q8N4L8 307 aa27.64■■■□□ 2.01
CDK9-201ENST00000373264 KIAA1468Q9P260 1216 aa27.64■■■□□ 2.01
CDK9-201ENST00000373264 LINC00116Q8NCU8 138 aa27.63■■■□□ 2.01
CDK9-201ENST00000373264 AHDC1Q5TGY3 1603 aaPredicted RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms