RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TUBE1Q9UJT0 475 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 CASP7P55210 303 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 FAM193AP78312 1265 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 CCDC158Q5M9N0 1113 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 OLFM4Q6UX06 510 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 TMEM139Q8IV31 216 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 PHKBQ93100 1093 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 BAG1Q99933 345 aaPredicted RBP15.75■□□□□ 0.11
USP49-201ENST00000373006 IRX2Q9BZI1 471 aaPredicted RBP15.75■□□□□ 0.11
USP49-201ENST00000373006 PCDHA5Q9Y5H7 936 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 TULP2O00295 520 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 DHX8Q14562 1220 aaKnown RBP15.75■□□□□ 0.11
USP49-201ENST00000373006 KARSQ15046 597 aaKnown RBP15.75■□□□□ 0.11
USP49-201ENST00000373006 KRBA2Q6ZNG9 492 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 RALYLQ86SE5 291 aaKnown RBP15.75■□□□□ 0.11
USP49-201ENST00000373006 VPS37DQ86XT2 251 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 CABLES1Q8TDN4 633 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 PARD6BQ9BYG5 372 aa15.75■□□□□ 0.11
USP49-201ENST00000373006 ZNF330Q9Y3S2 320 aaPredicted RBP15.75■□□□□ 0.11
USP49-201ENST00000373006 SNRPA1P09661 255 aaKnown RBP15.74■□□□□ 0.11
USP49-201ENST00000373006 PPP2R3AQ06190 1150 aa15.74■□□□□ 0.11
USP49-201ENST00000373006 METTL16Q86W50 562 aaKnown RBP15.74■□□□□ 0.11
USP49-201ENST00000373006 CREBRFQ8IUR6 639 aa15.74■□□□□ 0.11
USP49-201ENST00000373006 GPATCH11Q8N954 259 aa15.74■□□□□ 0.11
USP49-201ENST00000373006 NKX2-3Q8TAU0 364 aa15.74■□□□□ 0.11
USP49-201ENST00000373006 CCDC85AQ96PX6 553 aaPredicted RBP15.74■□□□□ 0.11
USP49-201ENST00000373006 ALG1Q9BT22 464 aa15.74■□□□□ 0.11
USP49-201ENST00000373006 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
USP49-201ENST00000373006 ARHGAP6O43182 974 aa15.74■□□□□ 0.11
USP49-201ENST00000373006 BMP6P22004 513 aa15.74■□□□□ 0.11
USP49-201ENST00000373006 PUS7LQ9H0K6 701 aaKnown RBP15.74■□□□□ 0.11
USP49-201ENST00000373006 ANKRD65E5RJM6 399 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 PI16Q6UXB8 463 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 MB21D2Q8IYB1 491 aaPredicted RBP15.73■□□□□ 0.11
USP49-201ENST00000373006 CNNM3Q8NE01 707 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 MAP3K9P80192 1104 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 CHRNA2Q15822 529 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 FEZ2Q9UHY8 353 aaPredicted RBP15.73■□□□□ 0.11
USP49-201ENST00000373006 BRD2P25440 801 aaKnown RBP15.73■□□□□ 0.11
USP49-201ENST00000373006 ZNF827Q17R98 1081 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 KRT40Q6A162 431 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 TRMT44Q8IYL2 757 aaKnown RBP15.73■□□□□ 0.11
USP49-201ENST00000373006 NCOA7Q8NI08 942 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 DHX58Q96C10 678 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 MPHOSPH8Q99549 860 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 ARFGAP3Q9NP61 516 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 HPSEQ9Y251 543 aa15.73■□□□□ 0.11
USP49-201ENST00000373006 TPM1P09493 284 aa15.72■□□□□ 0.11
USP49-201ENST00000373006 ADORA1P30542 326 aa15.72■□□□□ 0.11
USP49-201ENST00000373006 IL15P40933 162 aaPredicted RBP15.72■□□□□ 0.11
USP49-201ENST00000373006 MTF1Q14872 753 aa15.72■□□□□ 0.11
USP49-201ENST00000373006 GPR161Q8N6U8 529 aaKnown RBP15.72■□□□□ 0.11
USP49-201ENST00000373006 ZNF213O14771 459 aa15.72■□□□□ 0.11
USP49-201ENST00000373006 SENP2Q9HC62 589 aa15.72■□□□□ 0.11
USP49-201ENST00000373006 HSPA2P54652 639 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 SCARF1Q14162 830 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 CCDC102BQ68D86 513 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 KRT28Q7Z3Y7 464 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 KCNH3Q9ULD8 1083 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 MRFAP1Q9Y605 127 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 EYA2O00167 538 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 PTPAQ15257 358 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 MICU3Q86XE3 530 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 TC2NQ8N9U0 490 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 CCDC12Q8WUD4 166 aaPredicted RBP15.71■□□□□ 0.11
USP49-201ENST00000373006 UBXN6Q9BZV1 441 aa15.71■□□□□ 0.11
USP49-201ENST00000373006 PHKG2P15735 406 aa15.71■□□□□ 0.1
USP49-201ENST00000373006 TTLL7Q6ZT98 887 aa15.71■□□□□ 0.1
USP49-201ENST00000373006 FBXL16Q8N461 479 aa15.71■□□□□ 0.1
USP49-201ENST00000373006 PLBD2Q8NHP8 589 aa15.71■□□□□ 0.1
USP49-201ENST00000373006 MYL10Q9BUA6 226 aa15.71■□□□□ 0.1
USP49-201ENST00000373006 LZTFL1Q9NQ48 299 aa15.71■□□□□ 0.1
USP49-201ENST00000373006 FMR1Q06787 632 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP49-201ENST00000373006 TTC39AQ5SRH9 613 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 TXLNBQ8N3L3 684 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 FUT8Q9BYC5 575 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 C19orf44Q9H6X5 657 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 NFE2L3Q9Y4A8 694 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 A0A0U1RQJ8 604 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 H7C1W4 665 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 METAP2P50579 478 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP49-201ENST00000373006 PROSER2Q86WR7 435 aaPredicted RBP15.7■□□□□ 0.1
USP49-201ENST00000373006 GRAMD1CQ8IYS0 662 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 JMYQ8N9B5 988 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 ATRIPQ8WXE1 791 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 ZBTB3Q9H5J0 574 aa15.7■□□□□ 0.1
USP49-201ENST00000373006 PUF60Q9UHX1 559 aaKnown RBP15.7■□□□□ 0.1
USP49-201ENST00000373006 OVOS2A0A0G2JMS6 1433 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 KDM6AO15550 1401 aaPredicted RBP15.69■□□□□ 0.1
USP49-201ENST00000373006 ZAP70P43403 619 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 RESP18Q5W5W9 173 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 RSRC2Q7L4I2 434 aaKnown RBP15.69■□□□□ 0.1
USP49-201ENST00000373006 CCDC191Q8NCU4 936 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 CPLX3Q8WVH0 158 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 KIFC2Q96AC6 838 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 MAP3K14Q99558 947 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 LOC102724159A0A0B4J2E5 919 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 LMAN1P49257 510 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 GRIN1Q05586 938 aa15.69■□□□□ 0.1
USP49-201ENST00000373006 PWP2Q15269 919 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 316.5 ms