RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
LCN2-202ENST00000372998 TMC6Q7Z403 805 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 TRIM22Q8IYM9 498 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
LCN2-202ENST00000372998 PYM1Q9BRP8 204 aaKnown RBP12.55□□□□□ -0.4
LCN2-202ENST00000372998 TUBB2BQ9BVA1 445 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 XPO4Q9C0E2 1151 aaKnown RBP12.55□□□□□ -0.4
LCN2-202ENST00000372998 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
LCN2-202ENST00000372998 ZBTB3Q9H5J0 574 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 IFNKQ9P0W0 207 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 PRDM4Q9UKN5 801 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 CLIC4Q9Y696 253 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 MROH5Q6ZUA9 1318 aa12.55□□□□□ -0.4
LCN2-202ENST00000372998 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 ERICH2A1L162 156 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 SERPINC1P01008 464 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 POLR3DP05423 398 aaPredicted RBP12.54□□□□□ -0.4
LCN2-202ENST00000372998 XBP1P17861 261 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 ARID4AP29374 1257 aaPredicted RBP12.54□□□□□ -0.4
LCN2-202ENST00000372998 ZAP70P43403 619 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 NT5C2P49902 561 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 RILPL1Q5EBL4 403 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 RESP18Q5W5W9 173 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 GIGYF2Q6Y7W6 1299 aaKnown RBP12.54□□□□□ -0.4
LCN2-202ENST00000372998 MLKLQ8NB16 471 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 MPHOSPH8Q99549 860 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 LRP6O75581 1613 aa12.54□□□□□ -0.4
LCN2-202ENST00000372998 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
LCN2-202ENST00000372998 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 GOLGA8AA7E2F4 631 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
LCN2-202ENST00000372998 ARHGAP6O43182 974 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 PDE8AO60658 829 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 A1BGP04217 495 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
LCN2-202ENST00000372998 FOSBP53539 338 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 UBASH3AP57075 661 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 ETF1P62495 437 aaKnown RBP12.53□□□□□ -0.4
LCN2-202ENST00000372998 DPCR1Q3MIW9 517 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 KRT40Q6A162 431 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 APOA5Q6Q788 366 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 NFXL1Q6ZNB6 911 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 NBPF11Q86T75 865 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 VPS37DQ86XT2 251 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
LCN2-202ENST00000372998 PPP1R13BQ96KQ4 1090 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
LCN2-202ENST00000372998 IQSEC3Q9UPP2 1182 aaPredicted RBP12.53□□□□□ -0.4
LCN2-202ENST00000372998 RIPOR2Q9Y4F9 1068 aa12.53□□□□□ -0.4
LCN2-202ENST00000372998 CCDC66A2RUB6 948 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 TOP1P11387 765 aaKnown RBP12.52□□□□□ -0.41
LCN2-202ENST00000372998 PCP11498 1178 aaKnown RBP12.52□□□□□ -0.41
LCN2-202ENST00000372998 SLC5A1P13866 664 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 IFNAR1P17181 557 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 CTSWP56202 376 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 ANTXR2P58335 489 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 PUM3Q15397 648 aaKnown RBP12.52□□□□□ -0.41
LCN2-202ENST00000372998 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 SLC9C2Q5TAH2 1124 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 JAKMIP3Q5VZ66 844 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 TTLL5Q6EMB2 1281 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 HOMER1Q86YM7 354 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 CNNM3Q8NE01 707 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 LPIN2Q92539 896 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 AIDAQ96BJ3 306 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 ZNF594Q96JF6 807 aaPredicted RBP12.52□□□□□ -0.41
LCN2-202ENST00000372998 FTOQ9C0B1 505 aaKnown RBP eCLIP12.52□□□□□ -0.41
LCN2-202ENST00000372998 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.41
LCN2-202ENST00000372998 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 RIC1Q4ADV7 1423 aa12.52□□□□□ -0.41
LCN2-202ENST00000372998 PDE8BO95263 885 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 FMNL1O95466 1100 aaPredicted RBP12.51□□□□□ -0.41
LCN2-202ENST00000372998 APPP05067 770 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
LCN2-202ENST00000372998 HAND2P61296 217 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 NCAPHQ15003 741 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 TMEM67Q5HYA8 995 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 KRBA2Q6ZNG9 492 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 CHST3Q7LGC8 479 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 VSTM4Q8IW00 320 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 MNS1Q8NEH6 495 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 TSC1Q92574 1164 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.51□□□□□ -0.41
LCN2-202ENST00000372998 NAA15Q9BXJ9 866 aaKnown RBP12.51□□□□□ -0.41
LCN2-202ENST00000372998 PUS3Q9BZE2 481 aaKnown RBP12.51□□□□□ -0.41
LCN2-202ENST00000372998 PUS7LQ9H0K6 701 aaKnown RBP12.51□□□□□ -0.41
LCN2-202ENST00000372998 DNAI1Q9UI46 699 aa12.51□□□□□ -0.41
LCN2-202ENST00000372998 ZNF215Q9UL58 517 aaPredicted RBP12.51□□□□□ -0.41
LCN2-202ENST00000372998 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.51□□□□□ -0.41
LCN2-202ENST00000372998 RTL9Q8NET4 1388 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms