RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 MBD4O95243 580 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 JAG2Q9Y219 1238 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 PLCD1P51178 756 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 MAP7D1Q3KQU3 841 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 PDE6BP35913 854 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 MTUS1Q9ULD2 1270 aa11.11□□□□□ -0.63
TRERF1-204ENST00000372922 HOXC9P31274 260 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
TRERF1-204ENST00000372922 GOLGA1Q92805 767 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 BEGAINQ9BUH8 593 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 CCDC129Q6ZRS4 1044 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 PTPDC1A2A3K4 754 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 KRT5P13647 590 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 STRN3Q13033 797 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 DCAF17Q5H9S7 520 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-204ENST00000372922 EXOC7Q9UPT5 735 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 NOP56O00567 594 aaKnown RBP11.1□□□□□ -0.63
TRERF1-204ENST00000372922 FAM114A2Q9NRY5 505 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 PDE8AO60658 829 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 CCT6AP40227 531 aaKnown RBP11.1□□□□□ -0.63
TRERF1-204ENST00000372922 BIRC3Q13489 604 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 HAUS3Q68CZ6 603 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 CEP85Q6P2H3 762 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 ARFGAP3Q9NP61 516 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 MORC4Q8TE76 937 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 SMC6Q96SB8 1091 aa11.1□□□□□ -0.63
TRERF1-204ENST00000372922 DDX21Q9NR30 783 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRERF1-204ENST00000372922 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRERF1-204ENST00000372922 ITGA6P23229 1130 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 HSPA4P34932 840 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 PPP1R7Q15435 360 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 DNAJC25Q9H1X3 360 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 MTRF1LQ9UGC7 380 aaKnown RBP11.09□□□□□ -0.63
TRERF1-204ENST00000372922 DNAI1Q9UI46 699 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 SYCP2Q9BX26 1530 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 LETM2Q2VYF4 491 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 ANKS4BQ8N8V4 417 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 PKD2L1Q9P0L9 805 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 ZBTB16Q05516 673 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 SEL1L2Q5TEA6 688 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 RNF168Q8IYW5 571 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-204ENST00000372922 CSRNP2Q9H175 543 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 ZNF408Q9H9D4 720 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 CALUO43852 315 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-204ENST00000372922 ZBED4O75132 1171 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 EYA1Q99502 592 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 SH3BP5O60239 455 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 DPP8Q6V1X1 898 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-204ENST00000372922 TMEM87BQ96K49 555 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 FEZ2Q9UHY8 353 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-204ENST00000372922 ANAPC4Q9UJX5 808 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 POLR3AO14802 1390 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-204ENST00000372922 CCDC169A6NNP5 214 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 ALDH3A1P30838 453 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 PSMC4P43686 418 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 AK2P54819 239 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 TRPC3Q13507 836 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 RAPGEF1Q13905 1077 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 WHAMMQ8TF30 809 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-204ENST00000372922 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
TRERF1-204ENST00000372922 VWA3BQ502W6 1294 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 CEP120Q8N960 986 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 RNF34Q969K3 372 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 DCTPP1Q9H773 170 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 CCDC6Q16204 474 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 CEP128Q6ZU80 1094 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 LARGE2Q8N3Y3 721 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 CCDC114Q96M63 670 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 ZKSCAN3Q9BRR0 538 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 TRIM6Q9C030 488 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-204ENST00000372922 CCDC87Q9NVE4 849 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 AGTPBP1Q9UPW5 1226 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 LUC7L2Q9Y383 392 aaKnown RBP11.08□□□□□ -0.64
TRERF1-204ENST00000372922 ZNF608Q9ULD9 1512 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-204ENST00000372922 SNX21Q969T3 373 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 KIFC2Q96AC6 838 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 PLIN2Q99541 437 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 BABAM1Q9NWV8 329 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 DEXIO95424 95 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 HARSP12081 509 aaKnown RBP11.08□□□□□ -0.64
TRERF1-204ENST00000372922 VWA3AA6NCI4 1184 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 KCNA4P22459 653 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 STX17P56962 302 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 CNNM4Q6P4Q7 775 aa11.08□□□□□ -0.64
TRERF1-204ENST00000372922 METTL22Q9BUU2 404 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-204ENST00000372922 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRERF1-204ENST00000372922 V9GYY5 206 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-204ENST00000372922 ELP1O95163 1332 aa11.07□□□□□ -0.64
TRERF1-204ENST00000372922 RFC1P35251 1148 aaPredicted RBP11.07□□□□□ -0.64
TRERF1-204ENST00000372922 EP400NLQ6ZTU2 488 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms