RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 MYOZ2Q9NPC6 264 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 KIF3AQ9Y496 699 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 PTCH2Q9Y6C5 1203 aa15.25■□□□□ 0.03
CHCHD1-202ENST00000372837 LRRC37AA6NMS7 1700 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 CAVIN2O95810 425 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 UBTFL1P0CB47 393 aaPredicted RBP15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 INHBEP58166 350 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 CRHR2Q13324 411 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 LDLRAD1Q5T700 205 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 G2E3Q7L622 706 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 NBPF11Q86T75 865 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 CREBRFQ8IUR6 639 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
CHCHD1-202ENST00000372837 TAF1P21675 1872 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 A0A1W2PPC1 479 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 MYL6BP14649 208 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 NEK4P51957 841 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 GPSM2P81274 684 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 SP3Q02447 781 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 PRKG1Q13976 671 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 HDGFL1Q5TGJ6 251 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 TMC4Q7Z404 712 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 AGBL3Q8NEM8 1001 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 LAMB2P55268 1798 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 KDM3BQ7LBC6 1761 aa15.23■□□□□ 0.03
CHCHD1-202ENST00000372837 CCDC171Q6TFL3 1326 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 ANKRD36CQ5JPF3 1778 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 SMARCA5O60264 1052 aaPredicted RBP15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 KDM4AO75164 1064 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 NF2P35240 595 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 RSBN1LQ6PCB5 846 aaPredicted RBP15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 ZGPATQ8N5A5 531 aaKnown RBP15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 SSH3Q8TE77 659 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 SHISA4Q96DD7 197 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 GMLQ99445 158 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 MIS18AQ9NYP9 233 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 STXBP5LQ9Y2K9 1186 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 VCANP13611 3396 aa15.22■□□□□ 0.03
CHCHD1-202ENST00000372837 F6X3S4 739 aa15.21■□□□□ 0.03
CHCHD1-202ENST00000372837 USP17L8P0C7I0 530 aa15.21■□□□□ 0.03
CHCHD1-202ENST00000372837 NBPF9Q3BBW0 867 aa15.21■□□□□ 0.03
CHCHD1-202ENST00000372837 ARMC9Q7Z3E5 817 aa15.21■□□□□ 0.03
CHCHD1-202ENST00000372837 NECTIN2Q92692 538 aa15.21■□□□□ 0.03
CHCHD1-202ENST00000372837 FZD1Q9UP38 647 aa15.21■□□□□ 0.03
CHCHD1-202ENST00000372837 DDX60Q8IY21 1712 aaKnown RBP15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 DEFB123Q8N688 67 aa15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 TBC1D16Q8TBP0 767 aa15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 OTUD7AQ8TE49 926 aaPredicted RBP15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 SH3TC2Q8TF17 1288 aa15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 ZSCAN31Q96LW9 406 aaPredicted RBP15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 EYA3Q99504 573 aa15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 LAMB4A4D0S4 1761 aa15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 RPAP1Q9BWH6 1393 aaPredicted RBP15.2■□□□□ 0.02
CHCHD1-202ENST00000372837 CTIFO43310 598 aaKnown RBP15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 HSPA4P34932 840 aa15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 RBM10P98175 930 aaKnown RBP15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 POLA2Q14181 598 aa15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 Q7L0L9 218 aa15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 UBE2Q1Q7Z7E8 422 aa15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 CELF1Q92879 486 aaKnown RBP15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 PRDM6Q9NQX0 595 aa15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 ANGEL1Q9UNK9 670 aaKnown RBP15.19■□□□□ 0.02
CHCHD1-202ENST00000372837 APBB1O00213 710 aa15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 ZBTB48P10074 688 aaPredicted RBP15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 ZSCAN20P17040 1043 aaPredicted RBP15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 CHMLP26374 656 aa15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 PKP1Q13835 747 aa15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 DHX8Q14562 1220 aaKnown RBP15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 ANKRD7Q92527 254 aa15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 SLC10A4Q96EP9 437 aa15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 WNK4Q96J92 1243 aa15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 ZC3H12CQ9C0D7 883 aaKnown RBP15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 LRRFIP2Q9Y608 721 aaKnown RBP15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 SPTBN5Q9NRC6 3674 aaKnown RBP15.18■□□□□ 0.02
CHCHD1-202ENST00000372837 COL4A1P02462 1669 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 ALDH1L1O75891 902 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 EIF4A1P60842 406 aaKnown RBP15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 DNTTIP2Q5QJE6 756 aaKnown RBP15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 GPR153Q6NV75 609 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 ANKRD13DQ6ZTN6 518 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 ERC1Q8IUD2 1116 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 KIAA1524Q8TCG1 905 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 PTPN18Q99952 460 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 TM6SF1Q9BZW5 370 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 USP44Q9H0E7 712 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 SH2B1Q9NRF2 756 aaPredicted RBP15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 NR2E3Q9Y5X4 410 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 TTC41PQ6P2S7 1318 aa15.17■□□□□ 0.02
CHCHD1-202ENST00000372837 ZSCAN22P10073 491 aaPredicted RBP15.16■□□□□ 0.02
CHCHD1-202ENST00000372837 GABPB1Q06547 395 aaPredicted RBP15.16■□□□□ 0.02
CHCHD1-202ENST00000372837 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
CHCHD1-202ENST00000372837 FUCA2Q9BTY2 467 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms