RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 CNNM4Q6P4Q7 775 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 NSFL1CQ9UNZ2 370 aaKnown RBP12.93□□□□□ -0.34
VCL-202ENST00000372755 SPOPO43791 374 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 RILPL1Q5EBL4 403 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 C8orf58Q8NAV2 365 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 IFT74Q96LB3 600 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 GLT8D2Q9H1C3 349 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 ACTN4O43707 911 aaKnown RBP12.93□□□□□ -0.34
VCL-202ENST00000372755 HAUS3Q68CZ6 603 aa12.93□□□□□ -0.34
VCL-202ENST00000372755 ASXL1Q8IXJ9 1541 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 DKC1O60832 514 aaKnown RBP eCLIP12.92□□□□□ -0.34
VCL-202ENST00000372755 CCT6AP40227 531 aaKnown RBP12.92□□□□□ -0.34
VCL-202ENST00000372755 GRM1Q13255 1194 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
VCL-202ENST00000372755 STK10O94804 968 aaKnown RBP12.92□□□□□ -0.34
VCL-202ENST00000372755 RASA3Q14644 834 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 CHST3Q7LGC8 479 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 VPS52Q8N1B4 723 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 PLIN2Q99541 437 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 PRIM1P49642 420 aaKnown RBP12.92□□□□□ -0.34
VCL-202ENST00000372755 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
VCL-202ENST00000372755 DCTPP1Q9H773 170 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 RPRD2Q5VT52 1461 aaKnown RBP12.92□□□□□ -0.34
VCL-202ENST00000372755 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 TTC31Q49AM3 519 aaPredicted RBP12.92□□□□□ -0.34
VCL-202ENST00000372755 AFAP1L2Q8N4X5 818 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 RSRC1Q96IZ7 334 aaKnown RBP12.92□□□□□ -0.34
VCL-202ENST00000372755 SWAP70Q9UH65 585 aa12.92□□□□□ -0.34
VCL-202ENST00000372755 PLCH2O75038 1416 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
VCL-202ENST00000372755 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■□□□□ 9.4
VCL-202ENST00000372755 FAM160A1Q05DH4 1040 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 LETM2Q2VYF4 491 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 CEP85Q6P2H3 762 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 SMC5Q8IY18 1101 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 UBL4BQ8N7F7 174 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 UAP1Q16222 522 aaPredicted RBP12.91□□□□□ -0.34
VCL-202ENST00000372755 C16orf71Q8IYS4 520 aaPredicted RBP12.91□□□□□ -0.34
VCL-202ENST00000372755 NOX5Q96PH1 765 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 TOM1O60784 492 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 DEXIO95424 95 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 ZNF174Q15697 407 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 GEN1Q17RS7 908 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
VCL-202ENST00000372755 RNF34Q969K3 372 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
VCL-202ENST00000372755 SP4Q02446 784 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 DNAJC21Q5F1R6 531 aaKnown RBP12.91□□□□□ -0.34
VCL-202ENST00000372755 PFDN4Q9NQP4 134 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 PDE4DQ08499 809 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 STRN3Q13033 797 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 CYP26C1Q6V0L0 522 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 PPP1R21Q6ZMI0 780 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 CROCCP2Q86T23 111 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
VCL-202ENST00000372755 TRPC3Q13507 836 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
VCL-202ENST00000372755 ASIC2Q16515 512 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 BRDTQ58F21 947 aaPredicted RBP12.9□□□□□ -0.34
VCL-202ENST00000372755 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 FLT4P35916 1363 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 TBC1D8BQ0IIM8 1120 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 NAPGQ99747 312 aaPredicted RBP12.9□□□□□ -0.34
VCL-202ENST00000372755 HAUS7Q99871 368 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 MBD4O95243 580 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 TFCP2L1Q9NZI6 479 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 ZNF365Q70YC5 407 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
VCL-202ENST00000372755 UTP11Q9Y3A2 253 aaKnown RBP12.9□□□□□ -0.34
VCL-202ENST00000372755 ATP11AP98196 1134 aa12.9□□□□□ -0.35
VCL-202ENST00000372755 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.35
VCL-202ENST00000372755 TEX11Q8IYF3 940 aa12.9□□□□□ -0.35
VCL-202ENST00000372755 HELBQ8NG08 1087 aaPredicted RBP12.9□□□□□ -0.35
VCL-202ENST00000372755 TMOD4Q9NZQ9 345 aa12.9□□□□□ -0.35
VCL-202ENST00000372755 VIMP08670 466 aaKnown RBP12.89□□□□□ -0.35
VCL-202ENST00000372755 MTHFSDQ2M296 383 aaKnown RBP12.89□□□□□ -0.35
VCL-202ENST00000372755 B4GALNT4Q76KP1 1039 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 NUP58Q9BVL2 599 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 ITIH3Q06033 890 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 CERS3Q8IU89 383 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 IGSF22Q8N9C0 903 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 PLB1Q6P1J6 1458 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 A6NNZ2 444 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 CHMLP26374 656 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 TUBB8Q3ZCM7 444 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 C8orf74Q6P047 294 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 FANCAO15360 1455 aa12.89□□□□□ -0.35
VCL-202ENST00000372755 DAPK3O43293 454 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms