RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 CTSWP56202 376 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 HAUS7Q99871 368 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 ARMT1Q9H993 441 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 KRT86O43790 486 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 LMOD1P29536 600 aaPredicted RBP11.87□□□□□ -0.51
NUP188-201ENST00000372577 CTAGE6Q86UF2 777 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 CTAGE4Q8IX94 777 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 ZBTB38Q8NAP3 1195 aaPredicted RBP11.87□□□□□ -0.51
NUP188-201ENST00000372577 ZNF594Q96JF6 807 aaPredicted RBP11.87□□□□□ -0.51
NUP188-201ENST00000372577 GGA1Q9UJY5 639 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 CDC42BPBQ9Y5S2 1711 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 TMCO5BA8MYB1 307 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 CIAO1O76071 339 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 IFFO1Q0D2I5 559 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 LMBR1Q8WVP7 490 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 JADE2Q9NQC1 790 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 NOP2P46087 812 aaKnown RBP11.87□□□□□ -0.51
NUP188-201ENST00000372577 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
NUP188-201ENST00000372577 RGS12O14924 1447 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 PTCH1Q13635 1447 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 NCAPD2Q15021 1401 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
NUP188-201ENST00000372577 MCM7P33993 719 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 TICAM2Q86XR7 235 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 PAF1Q8N7H5 531 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 TTC12Q9H892 705 aaPredicted RBP11.87□□□□□ -0.51
NUP188-201ENST00000372577 LAMC1P11047 1609 aa11.87□□□□□ -0.51
NUP188-201ENST00000372577 F8W031 263 aaPredicted RBP11.86□□□□□ -0.51
NUP188-201ENST00000372577 TBC1D22AQ8WUA7 517 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 GTF3C6Q969F1 213 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 MED14O60244 1454 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 GOLGA6L10A0A0M3HER8 536 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 LMTK2Q8IWU2 1503 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 E7EWF7 191 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 TNNI2P48788 182 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
NUP188-201ENST00000372577 MICALCLQ6ZW33 695 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 SELENOOQ9BVL4 669 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 GLI2P10070 1586 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 UFL1O94874 794 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 MLKLQ8NB16 471 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 LMBRD1Q9NUN5 540 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 DNAI1Q9UI46 699 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 KCNH3Q9ULD8 1083 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 ZNF532Q9HCE3 1301 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 ZAP70P43403 619 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 CCDC91Q7Z6B0 441 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 FERMT2Q96AC1 680 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 CARD10Q9BWT7 1032 aa11.86□□□□□ -0.51
NUP188-201ENST00000372577 MADDQ8WXG6 1647 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 NEBLO76041 1014 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 KIF5AQ12840 1032 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 SV2BQ7L1I2 683 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 HS2ST1Q7LGA3 356 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 CDC42BPGQ6DT37 1551 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 A0A1B0GVL5 298 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 TUBB2AQ13885 445 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 CCDC65Q8IXS2 484 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 DIS3L2Q8IYB7 885 aaKnown RBP11.85□□□□□ -0.51
NUP188-201ENST00000372577 TUBB2BQ9BVA1 445 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
NUP188-201ENST00000372577 PCP11498 1178 aaKnown RBP11.85□□□□□ -0.51
NUP188-201ENST00000372577 RPL13P26373 211 aaKnown RBP11.85□□□□□ -0.51
NUP188-201ENST00000372577 ATG3Q9NT62 314 aa11.85□□□□□ -0.51
NUP188-201ENST00000372577 A2ML1A8K2U0 1454 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 KRT25Q7Z3Z0 450 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 EAF2Q96CJ1 260 aaPredicted RBP11.84□□□□□ -0.51
NUP188-201ENST00000372577 TSGA10Q9BZW7 698 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 TMEM94Q12767 1356 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 ADGRB3O60242 1522 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 RXRAP19793 462 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 AKNAD1Q5T1N1 836 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 ZNF830Q96NB3 372 aaPredicted RBP11.84□□□□□ -0.51
NUP188-201ENST00000372577 ARFGAP3Q9NP61 516 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 GSTTP1A0A1W2PQM5 241 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 UBXN1Q04323 297 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 HLTFQ14527 1009 aaKnown RBP eCLIP11.84□□□□□ -0.51
NUP188-201ENST00000372577 DYDC1Q8WWB3 177 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 BICD1Q96G01 975 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 CCDC42Q96M95 316 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 RBSNQ9H1K0 784 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 ABCA9Q8IUA7 1624 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 KCNQ3O43525 872 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 FAM13AO94988 1023 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 CNNM4Q6P4Q7 775 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 HOOK3Q86VS8 718 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 GOLGA1Q92805 767 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 CALCOCO1Q9P1Z2 691 aa11.84□□□□□ -0.51
NUP188-201ENST00000372577 LUC7L2Q9Y383 392 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms