RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 LCORLQ8N3X6 602 aa19■□□□□ 0.63
TMEM53-204ENST00000372243 ARMT1Q9H993 441 aa19■□□□□ 0.63
TMEM53-204ENST00000372243 RPAP1Q9BWH6 1393 aaPredicted RBP19■□□□□ 0.63
TMEM53-204ENST00000372243 APOBEC3HQ6NTF7 200 aaKnown RBP18.99■□□□□ 0.63
TMEM53-204ENST00000372243 ADAMTSL1Q8N6G6 1762 aa18.99■□□□□ 0.63
TMEM53-204ENST00000372243 DSCC1Q9BVC3 393 aa18.99■□□□□ 0.63
TMEM53-204ENST00000372243 LSG1Q9H089 658 aaKnown RBP18.99■□□□□ 0.63
TMEM53-204ENST00000372243 ANO2Q9NQ90 1003 aa18.99■□□□□ 0.63
TMEM53-204ENST00000372243 DYNLL1P63167 89 aaKnown RBP18.98■□□□□ 0.63
TMEM53-204ENST00000372243 CFAP100Q494V2 611 aa18.98■□□□□ 0.63
TMEM53-204ENST00000372243 MAP4K1Q92918 833 aa18.98■□□□□ 0.63
TMEM53-204ENST00000372243 DDNO94850 711 aaPredicted RBP18.98■□□□□ 0.63
TMEM53-204ENST00000372243 HSPD1P10809 573 aaKnown RBP18.98■□□□□ 0.63
TMEM53-204ENST00000372243 RHBDL3P58872 404 aa18.98■□□□□ 0.63
TMEM53-204ENST00000372243 CRNKL1Q9BZJ0 848 aaKnown RBP18.98■□□□□ 0.63
TMEM53-204ENST00000372243 GPRC5DQ9NZD1 345 aa18.98■□□□□ 0.63
TMEM53-204ENST00000372243 CNOT7Q9UIV1 285 aaKnown RBP18.98■□□□□ 0.63
TMEM53-204ENST00000372243 GLTPD2A6NH11 291 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 SPDYE2BA6NHP3 402 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 PATL2C9JE40 543 aaKnown RBP18.97■□□□□ 0.63
TMEM53-204ENST00000372243 SPDYE6P0CI01 402 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 RBM5P52756 815 aaKnown RBP eCLIP18.97■□□□□ 0.63
TMEM53-204ENST00000372243 DLGAP5Q15398 846 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 VPS53Q5VIR6 699 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 MICALL2Q8IY33 904 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 ZBED3Q96IU2 234 aaPredicted RBP18.97■□□□□ 0.63
TMEM53-204ENST00000372243 L3MBTL3Q96JM7 780 aaPredicted RBP18.97■□□□□ 0.63
TMEM53-204ENST00000372243 USP26Q9BXU7 913 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 MYOZ2Q9NPC6 264 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 SLC4A4Q9Y6R1 1079 aa18.97■□□□□ 0.63
TMEM53-204ENST00000372243 ZMYM6O95789 1325 aa18.96■□□□□ 0.63
TMEM53-204ENST00000372243 H7C1D1 291 aa18.96■□□□□ 0.63
TMEM53-204ENST00000372243 FOXP2O15409 715 aa18.96■□□□□ 0.63
TMEM53-204ENST00000372243 PTH1RQ03431 593 aa18.96■□□□□ 0.63
TMEM53-204ENST00000372243 GIMAP6Q6P9H5 292 aa18.96■□□□□ 0.63
TMEM53-204ENST00000372243 UPF2Q9HAU5 1272 aaKnown RBP18.96■□□□□ 0.63
TMEM53-204ENST00000372243 ECM29Q5VYK3 1845 aa18.95■□□□□ 0.62
TMEM53-204ENST00000372243 GSG1L2A8MUP6 293 aa18.95■□□□□ 0.62
TMEM53-204ENST00000372243 ALX1Q15699 326 aa18.95■□□□□ 0.62
TMEM53-204ENST00000372243 CDC42EP5Q6NZY7 148 aa18.95■□□□□ 0.62
TMEM53-204ENST00000372243 SH3RF3Q8TEJ3 882 aaPredicted RBP18.95■□□□□ 0.62
TMEM53-204ENST00000372243 PRMT6Q96LA8 375 aaPredicted RBP18.95■□□□□ 0.62
TMEM53-204ENST00000372243 ATP8A2Q9NTI2 1148 aa18.95■□□□□ 0.62
TMEM53-204ENST00000372243 CDK5RAP2Q96SN8 1893 aa18.95■□□□□ 0.62
TMEM53-204ENST00000372243 FOCADQ5VW36 1801 aa18.95■□□□□ 0.62
TMEM53-204ENST00000372243 NACAP1Q9BZK3 213 aa18.94■□□□□ 0.62
TMEM53-204ENST00000372243 USP40Q9NVE5 1235 aa18.94■□□□□ 0.62
TMEM53-204ENST00000372243 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
TMEM53-204ENST00000372243 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
TMEM53-204ENST00000372243 SHTN1A0MZ66 631 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 PRKAB2O43741 272 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 LMOD1P29536 600 aaPredicted RBP18.93■□□□□ 0.62
TMEM53-204ENST00000372243 TEX11Q8IYF3 940 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 IFNL3Q8IZI9 196 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 WNT10BO00744 389 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 MYO1BO43795 1136 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 NPM3O75607 178 aaKnown RBP18.93■□□□□ 0.62
TMEM53-204ENST00000372243 APPP05067 770 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 SDR42E1Q8WUS8 393 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 IDI2Q9BXS1 227 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 EPB41L4AQ9HCS5 686 aaPredicted RBP18.93■□□□□ 0.62
TMEM53-204ENST00000372243 MKRN1Q9UHC7 482 aaKnown RBP18.93■□□□□ 0.62
TMEM53-204ENST00000372243 CTNNA3Q9UI47 895 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
TMEM53-204ENST00000372243 WDR90Q96KV7 1748 aa18.93■□□□□ 0.62
TMEM53-204ENST00000372243 SCN4AP35499 1836 aa18.92■□□□□ 0.62
TMEM53-204ENST00000372243 FGAP02671 866 aa18.92■□□□□ 0.62
TMEM53-204ENST00000372243 USP5P45974 858 aa18.92■□□□□ 0.62
TMEM53-204ENST00000372243 NECTIN1Q15223 517 aa18.92■□□□□ 0.62
TMEM53-204ENST00000372243 DDRGK1Q96HY6 314 aa18.92■□□□□ 0.62
TMEM53-204ENST00000372243 DCP1AQ9NPI6 582 aaPredicted RBP18.92■□□□□ 0.62
TMEM53-204ENST00000372243 ADARB2Q9NS39 739 aaKnown RBP18.92■□□□□ 0.62
TMEM53-204ENST00000372243 WDHD1O75717 1129 aaPredicted RBP18.91■□□□□ 0.62
TMEM53-204ENST00000372243 HSPA4P34932 840 aa18.91■□□□□ 0.62
TMEM53-204ENST00000372243 EPS15P42566 896 aa18.91■□□□□ 0.62
TMEM53-204ENST00000372243 KIF4BQ2VIQ3 1234 aa18.91■□□□□ 0.62
TMEM53-204ENST00000372243 SPDYE2Q495Y8 402 aa18.91■□□□□ 0.62
TMEM53-204ENST00000372243 FKBP1CQ5VVH2 108 aa18.91■□□□□ 0.62
TMEM53-204ENST00000372243 SAMD7Q7Z3H4 446 aa18.91■□□□□ 0.62
TMEM53-204ENST00000372243 TGFBRAP1Q8WUH2 860 aa18.91■□□□□ 0.62
TMEM53-204ENST00000372243 NAPBQ9H115 298 aa18.91■□□□□ 0.62
TMEM53-204ENST00000372243 TDRD3Q9H7E2 651 aaKnown RBP18.91■□□□□ 0.62
TMEM53-204ENST00000372243 MCCP23508 829 aa18.9■□□□□ 0.62
TMEM53-204ENST00000372243 TMOD2Q9NZR1 351 aa18.9■□□□□ 0.62
TMEM53-204ENST00000372243 FLT1P17948 1338 aa18.9■□□□□ 0.62
TMEM53-204ENST00000372243 NAV1Q8NEY1 1877 aa18.9■□□□□ 0.62
TMEM53-204ENST00000372243 DDX60LQ5H9U9 1706 aaKnown RBP18.9■□□□□ 0.62
TMEM53-204ENST00000372243 IQCA1LA6NCM1 817 aa18.89■□□□□ 0.62
TMEM53-204ENST00000372243 EGFRP00533 1210 aa18.89■□□□□ 0.62
TMEM53-204ENST00000372243 TDO2P48775 406 aa18.89■□□□□ 0.62
TMEM53-204ENST00000372243 RBM25P49756 843 aaKnown RBP18.89■□□□□ 0.62
TMEM53-204ENST00000372243 NBPF9Q3BBW0 867 aa18.89■□□□□ 0.62
TMEM53-204ENST00000372243 TBC1D10BQ4KMP7 808 aaPredicted RBP18.89■□□□□ 0.62
TMEM53-204ENST00000372243 C22orf23Q9BZE7 217 aa18.89■□□□□ 0.62
TMEM53-204ENST00000372243 ZNF70Q9UC06 446 aaPredicted RBP18.89■□□□□ 0.62
TMEM53-204ENST00000372243 HACL1Q9UJ83 578 aa18.89■□□□□ 0.62
TMEM53-204ENST00000372243 ENTPD3O75355 529 aa18.89■□□□□ 0.61
TMEM53-204ENST00000372243 SBK1Q52WX2 424 aa18.89■□□□□ 0.61
TMEM53-204ENST00000372243 RBM26Q5T8P6 1007 aaKnown RBP18.89■□□□□ 0.61
TMEM53-204ENST00000372243 RNF20Q5VTR2 975 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms