RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CEP104O60308 925 aa15.83■□□□□ 0.13
RAPGEF1-202ENST00000372190 FAM196AQ6ZSG2 479 aa15.83■□□□□ 0.13
RAPGEF1-202ENST00000372190 BEGAINQ9BUH8 593 aa15.83■□□□□ 0.13
RAPGEF1-202ENST00000372190 PABPN1LA6NDY0 278 aaKnown RBP15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 DNAJC8O75937 253 aaPredicted RBP15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 LUC7L3O95232 432 aaKnown RBP15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 ALDH1B1P30837 517 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 IL13P35225 146 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 TSHZ3Q63HK5 1081 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 RNF10Q8N5U6 811 aaKnown RBP15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 VCX3AQ9NNX9 186 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 VPS41P49754 854 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 HDXQ7Z353 690 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 DNAJC10Q8IXB1 793 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 GSDMBQ8TAX9 411 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 DDX19AQ9NUU7 478 aaKnown RBP15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 LIMCH1Q9UPQ0 1083 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 PDE6BP35913 854 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 LGR6Q9HBX8 967 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 MKL2Q9ULH7 1088 aa15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 PA2G4Q9UQ80 394 aaKnown RBP15.83■□□□□ 0.12
RAPGEF1-202ENST00000372190 GIGYF1O75420 1035 aaPredicted RBP15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 KRT27Q7Z3Y8 459 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 PDE8AO60658 829 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 TRIM37O94972 964 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 CCT2P78371 535 aaKnown RBP15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 ATP8B2P98198 1209 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 PRPF4BQ13523 1007 aaKnown RBP15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 AFAP1L1Q8TED9 768 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 KLHL40Q2TBA0 621 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 NIM1KQ8IY84 436 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 BIN2Q9UBW5 565 aaPredicted RBP15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 A1BGP04217 495 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 LCA5Q86VQ0 697 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 ESR2Q92731 530 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 DENND2AQ9ULE3 1009 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 KRT24Q2M2I5 525 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 TRMT1LQ7Z2T5 733 aaKnown RBP15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 CKAP2LQ8IYA6 745 aa15.82■□□□□ 0.12
RAPGEF1-202ENST00000372190 ITGA6P23229 1130 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 IFIT1BQ5T764 474 aaKnown RBP15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 PLXNC1O60486 1568 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 WTAPQ15007 396 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 ZSCAN23Q3MJ62 389 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 CCDC24Q8N4L8 307 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 MAGEB6Q8N7X4 407 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 BABAM1Q9NWV8 329 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 METAP2P50579 478 aaKnown RBP eCLIP15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 SATB1Q01826 763 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 PPP2R5AQ15172 486 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 MICU3Q86XE3 530 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 ARHGAP24Q8N264 748 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 CAVIN2O95810 425 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 CPLX3Q8WVH0 158 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 PAG1Q9NWQ8 432 aa15.81■□□□□ 0.12
RAPGEF1-202ENST00000372190 GUCY1B3Q02153 619 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 ERCC6LQ2NKX8 1250 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 PIK3R5Q8WYR1 880 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 BICC1Q9H694 974 aaKnown RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 METP08581 1390 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 B4DLN1 442 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 SMIM24O75264 130 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 MRPL12P52815 198 aaKnown RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 STX1AQ16623 288 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 EAPPQ56P03 285 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 DACT3Q96B18 629 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 MCM9Q9NXL9 1143 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 TFCP2Q12800 502 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 TBC1D9Q6ZT07 1266 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 RAB11FIP4Q86YS3 637 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 NDUFAB1O14561 156 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 GNAT2P19087 354 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 METTL22Q9BUU2 404 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 EIF2AQ9BY44 585 aaKnown RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 PICK1Q9NRD5 415 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 RBM27Q9P2N5 1060 aaKnown RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 HIBADHP31937 336 aaKnown RBP15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 ACTN2P35609 894 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 FERMT1Q9BQL6 677 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 HMG20BQ9P0W2 317 aa15.8■□□□□ 0.12
RAPGEF1-202ENST00000372190 MAGI3Q5TCQ9 1506 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 ERVK-7P63135 1459 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 TRPC3Q13507 836 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 BMP2KLQ5H9B9 411 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 SMC1BQ8NDV3 1235 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 CXorf38Q8TB03 319 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 NEK1Q96PY6 1258 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 FAM160A1Q05DH4 1040 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 MIGA1Q8NAN2 632 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 USP16Q9Y5T5 823 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 PARD3Q8TEW0 1356 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 LRRD1A4D1F6 860 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 DNAI1Q9UI46 699 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 SELENOOQ9BVL4 669 aa15.79■□□□□ 0.12
RAPGEF1-202ENST00000372190 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms