RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZBTB7BO15156 539 aaPredicted RBP15.05■□□□□ 0
RAPGEF1-201ENST00000372189 TTC31Q49AM3 519 aaPredicted RBP15.05■□□□□ 0
RAPGEF1-201ENST00000372189 DDX12PQ92771 950 aa15.05■□□□□ 0
RAPGEF1-201ENST00000372189 ARHGEF10LQ9HCE6 1279 aa15.05■□□□□ 0
RAPGEF1-201ENST00000372189 ROBO2Q9HCK4 1378 aa15.05■□□□□ 0
RAPGEF1-201ENST00000372189 GSTTP1A0A1W2PQM5 241 aa15.05■□□□□ 0
RAPGEF1-201ENST00000372189 ECM2O94769 699 aaPredicted RBP15.05■□□□□ 0
RAPGEF1-201ENST00000372189 DNA2P51530 1060 aa15.05■□□□□ 0
RAPGEF1-201ENST00000372189 UBASH3AP57075 661 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 MAATS1Q7Z4T9 603 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 SMC5Q8IY18 1101 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 RMND1Q9NWS8 449 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 SLU7O95391 586 aaKnown RBP15.05■□□□□ -0
RAPGEF1-201ENST00000372189 KLHDC4Q8TBB5 520 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 PPIP5K2O43314 1243 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 STAT6P42226 847 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 GPR162Q16538 588 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 CHST3Q7LGC8 479 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 ZC4H2Q9NQZ6 224 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 BCS1LQ9Y276 419 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 KIF1BO60333 1816 aa15.05■□□□□ -0
RAPGEF1-201ENST00000372189 FERMT2Q96AC1 680 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 ARMT1Q9H993 441 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.04■□□□□ -0
RAPGEF1-201ENST00000372189 KRT2P35908 639 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 JADE2Q9NQC1 790 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 MYOM2P54296 1465 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 CCDC174Q6PII3 467 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 CEP112Q8N8E3 955 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 ERCC6L2Q5T890 1561 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 CTAGE15A4D2H0 777 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 CTAGE8P0CG41 777 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 GNA11P29992 359 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 CTAGE6Q86UF2 777 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 PLEKHM2Q8IWE5 1019 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 CTAGE4Q8IX94 777 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 DBNDD2Q9BQY9 259 aa15.04■□□□□ -0
RAPGEF1-201ENST00000372189 CTSWP56202 376 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 C2CD5Q86YS7 1000 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 CTAGE1Q96RT6 745 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 ZSWIM4Q9H7M6 989 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 DNAI1Q9UI46 699 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 TRIM37O94972 964 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 GBP6Q6ZN66 633 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 DHX32Q7L7V1 743 aaKnown RBP15.03■□□□□ -0
RAPGEF1-201ENST00000372189 NAP1L3Q99457 506 aaPredicted RBP15.03■□□□□ -0
RAPGEF1-201ENST00000372189 ATP7BP35670 1465 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
RAPGEF1-201ENST00000372189 F13A1P00488 732 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 SYKP43405 635 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 APOBRQ0VD83 1088 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 KRT27Q7Z3Y8 459 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 KCNG4Q8TDN1 519 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 BIN2Q9UBW5 565 aaPredicted RBP15.03■□□□□ -0
RAPGEF1-201ENST00000372189 TBC1D22AQ8WUA7 517 aa15.03■□□□□ -0
RAPGEF1-201ENST00000372189 FEZ2Q9UHY8 353 aaPredicted RBP15.03■□□□□ -0
RAPGEF1-201ENST00000372189 RTL1A6NKG5 1358 aa15.02■□□□□ -0
RAPGEF1-201ENST00000372189 LOC102724428A0A0B4J2F2 783 aa15.02■□□□□ -0
RAPGEF1-201ENST00000372189 SIK1P57059 783 aa15.02■□□□□ -0
RAPGEF1-201ENST00000372189 RPS8P62241 208 aaKnown RBP15.02■□□□□ -0
RAPGEF1-201ENST00000372189 SPATA5Q8NB90 893 aa15.02■□□□□ -0
RAPGEF1-201ENST00000372189 NEURL1BA8MQ27 555 aa15.02■□□□□ -0
RAPGEF1-201ENST00000372189 ARHGEF25Q86VW2 580 aa15.02■□□□□ -0
RAPGEF1-201ENST00000372189 FMNL3Q8IVF7 1028 aa15.02■□□□□ -0
RAPGEF1-201ENST00000372189 AATFQ9NY61 560 aaKnown RBP eCLIP15.02■□□□□ -0
RAPGEF1-201ENST00000372189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.02■□□□□ -0
RAPGEF1-201ENST00000372189 SATB2Q9UPW6 733 aa15.02■□□□□ -0
RAPGEF1-201ENST00000372189 CHMLP26374 656 aa15.02□□□□□ -0.01
RAPGEF1-201ENST00000372189 ISM2Q6H9L7 571 aa15.02□□□□□ -0.01
RAPGEF1-201ENST00000372189 IL17REQ8NFR9 667 aa15.02□□□□□ -0.01
RAPGEF1-201ENST00000372189 ZKSCAN3Q9BRR0 538 aa15.02□□□□□ -0.01
RAPGEF1-201ENST00000372189 NLGN1Q8N2Q7 840 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 USP37Q86T82 979 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 H7C1D1 291 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 TTC12Q9H892 705 aaPredicted RBP15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 N4BP3O15049 544 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 KCNQ3O43525 872 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 TUBB4BP68371 445 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 NCBP1Q09161 790 aaKnown RBP15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 DLGAP5Q15398 846 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 MRPS27Q92552 414 aaKnown RBP15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 ABCC3O15438 1527 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 IFI16Q16666 785 aaKnown RBP15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 RUFY3Q7L099 469 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 UNC5CLQ8IV45 518 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 WHAMMQ8TF30 809 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 GPCPD1Q9NPB8 672 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 WDR17Q8IZU2 1322 aa15.01□□□□□ -0.01
RAPGEF1-201ENST00000372189 ZMYM4Q5VZL5 1548 aa15□□□□□ -0.01
RAPGEF1-201ENST00000372189 TRIM75PA6NK02 468 aa15□□□□□ -0.01
RAPGEF1-201ENST00000372189 CA8P35219 290 aa15□□□□□ -0.01
RAPGEF1-201ENST00000372189 APPBP2Q92624 585 aa15□□□□□ -0.01
RAPGEF1-201ENST00000372189 GOLGA1Q92805 767 aa15□□□□□ -0.01
RAPGEF1-201ENST00000372189 TRIM63Q969Q1 353 aa15□□□□□ -0.01
RAPGEF1-201ENST00000372189 USP6P35125 1406 aa15□□□□□ -0.01
RAPGEF1-201ENST00000372189 RFC1P35251 1148 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-201ENST00000372189 CRKLP46109 303 aaKnown RBP15□□□□□ -0.01
RAPGEF1-201ENST00000372189 EAPPQ56P03 285 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-201ENST00000372189 PRPF31Q8WWY3 499 aaKnown RBP15□□□□□ -0.01
RAPGEF1-201ENST00000372189 NAP1L4Q99733 375 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms