RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 ZSCAN16Q9H4T2 348 aaPredicted RBP23.26■■□□□ 1.31
LHX3-202ENST00000371748 ANGEL1Q9UNK9 670 aaKnown RBP23.26■■□□□ 1.31
LHX3-202ENST00000371748 TACC3Q9Y6A5 838 aa23.26■■□□□ 1.31
LHX3-202ENST00000371748 TDO2P48775 406 aa23.26■■□□□ 1.31
LHX3-202ENST00000371748 CHMP4CQ96CF2 233 aa23.26■■□□□ 1.31
LHX3-202ENST00000371748 MYH13Q9UKX3 1938 aa23.25■■□□□ 1.31
LHX3-202ENST00000371748 SH2B2O14492 632 aaPredicted RBP23.25■■□□□ 1.31
LHX3-202ENST00000371748 ZNF500O60304 480 aaPredicted RBP23.25■■□□□ 1.31
LHX3-202ENST00000371748 GNAT2P19087 354 aa23.25■■□□□ 1.31
LHX3-202ENST00000371748 RNF214Q8ND24 703 aa23.25■■□□□ 1.31
LHX3-202ENST00000371748 LEO1Q8WVC0 666 aaPredicted RBP23.25■■□□□ 1.31
LHX3-202ENST00000371748 TFCP2L1Q9NZI6 479 aa23.25■■□□□ 1.31
LHX3-202ENST00000371748 CACNA1SQ13698 1873 aa23.25■■□□□ 1.31
LHX3-202ENST00000371748 SENP2Q9HC62 589 aa23.25■■□□□ 1.31
LHX3-202ENST00000371748 FBXO33Q7Z6M2 555 aa23.24■■□□□ 1.31
LHX3-202ENST00000371748 NACAP1Q9BZK3 213 aa23.24■■□□□ 1.31
LHX3-202ENST00000371748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.23■■□□□ 1.31
LHX3-202ENST00000371748 STK11IPQ8N1F8 1099 aa23.23■■□□□ 1.31
LHX3-202ENST00000371748 TERF1P54274 439 aa23.23■■□□□ 1.31
LHX3-202ENST00000371748 SLC51AQ86UW1 340 aa23.23■■□□□ 1.31
LHX3-202ENST00000371748 SDR42E1Q8WUS8 393 aa23.23■■□□□ 1.31
LHX3-202ENST00000371748 ANKRD2Q9GZV1 360 aa23.23■■□□□ 1.31
LHX3-202ENST00000371748 TIAM2Q8IVF5 1701 aa23.23■■□□□ 1.31
LHX3-202ENST00000371748 UBR3Q6ZT12 1888 aa23.23■■□□□ 1.31
LHX3-202ENST00000371748 CPLX1O14810 134 aa23.22■■□□□ 1.31
LHX3-202ENST00000371748 DHX16O60231 1041 aaKnown RBP23.22■■□□□ 1.31
LHX3-202ENST00000371748 RXRAP19793 462 aa23.22■■□□□ 1.31
LHX3-202ENST00000371748 MAGEB6P1A0A0J9YX57 407 aa23.22■■□□□ 1.31
LHX3-202ENST00000371748 KDM4AO75164 1064 aa23.22■■□□□ 1.31
LHX3-202ENST00000371748 AKNAD1Q5T1N1 836 aa23.22■■□□□ 1.31
LHX3-202ENST00000371748 BRWD3Q6RI45 1802 aa23.22■■□□□ 1.31
LHX3-202ENST00000371748 CEBPZQ03701 1054 aaKnown RBP23.21■■□□□ 1.31
LHX3-202ENST00000371748 CNBD1Q8NA66 436 aa23.21■■□□□ 1.31
LHX3-202ENST00000371748 IGDCC4Q8TDY8 1250 aa23.21■■□□□ 1.31
LHX3-202ENST00000371748 ZSWIM5Q9P217 1185 aa23.21■■□□□ 1.31
LHX3-202ENST00000371748 LIG1P18858 919 aa23.21■■□□□ 1.31
LHX3-202ENST00000371748 HIBADHP31937 336 aaKnown RBP23.21■■□□□ 1.31
LHX3-202ENST00000371748 RRP12Q5JTH9 1297 aaKnown RBP23.21■■□□□ 1.31
LHX3-202ENST00000371748 OTUD7BQ6GQQ9 843 aa23.21■■□□□ 1.31
LHX3-202ENST00000371748 MFSD6Q6ZSS7 791 aa23.21■■□□□ 1.31
LHX3-202ENST00000371748 ZNF384Q8TF68 577 aa23.21■■□□□ 1.31
LHX3-202ENST00000371748 TMEM87BQ96K49 555 aa23.21■■□□□ 1.31
LHX3-202ENST00000371748 ORC3Q9UBD5 711 aaPredicted RBP23.21■■□□□ 1.31
LHX3-202ENST00000371748 TXNRD3Q86VQ6 643 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 TOMM22Q9NS69 142 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 GOLGA6L4A6NEF3 574 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 LETM1O95202 739 aaPredicted RBP23.2■■□□□ 1.3
LHX3-202ENST00000371748 ADD1P35611 737 aaKnown RBP23.2■■□□□ 1.3
LHX3-202ENST00000371748 METAP2P50579 478 aaKnown RBP eCLIP23.2■■□□□ 1.3
LHX3-202ENST00000371748 DYNLL1P63167 89 aaKnown RBP23.2■■□□□ 1.3
LHX3-202ENST00000371748 TMEM67Q5HYA8 995 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 GIMAP6Q6P9H5 292 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 APOA5Q6Q788 366 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 RIOK1Q9BRS2 568 aaKnown RBP23.2■■□□□ 1.3
LHX3-202ENST00000371748 FTOQ9C0B1 505 aaKnown RBP eCLIP23.2■■□□□ 1.3
LHX3-202ENST00000371748 PDCL3Q9H2J4 239 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 LY9Q9HBG7 655 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 ZKSCAN5Q9Y2L8 839 aa23.2■■□□□ 1.3
LHX3-202ENST00000371748 NFXL1Q6ZNB6 911 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 MICU3Q86XE3 530 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 PGBD1Q96JS3 809 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 CNNM2Q9H8M5 875 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 CFAP45Q9UL16 551 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 TRIM37O94972 964 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 ADRA2BP18089 450 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 CCDC144CPQ8IYA2 1237 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 STAG1Q8WVM7 1258 aa23.19■■□□□ 1.3
LHX3-202ENST00000371748 BAZ2AQ9UIF9 1905 aaKnown RBP23.18■■□□□ 1.3
LHX3-202ENST00000371748 IFIT3O14879 490 aaKnown RBP23.18■■□□□ 1.3
LHX3-202ENST00000371748 SEMA3EO15041 775 aa23.18■■□□□ 1.3
LHX3-202ENST00000371748 CHAF1AQ13111 956 aaPredicted RBP23.18■■□□□ 1.3
LHX3-202ENST00000371748 ILDR1Q86SU0 546 aaPredicted RBP23.18■■□□□ 1.3
LHX3-202ENST00000371748 C8orf76Q96K31 380 aa23.18■■□□□ 1.3
LHX3-202ENST00000371748 MYL10Q9BUA6 226 aa23.18■■□□□ 1.3
LHX3-202ENST00000371748 KRT23Q9C075 422 aa23.18■■□□□ 1.3
LHX3-202ENST00000371748 MINDY4BA8MYZ0 360 aa23.18■■□□□ 1.3
LHX3-202ENST00000371748 PRR5LQ6MZQ0 368 aa23.18■■□□□ 1.3
LHX3-202ENST00000371748 GJB4Q9NTQ9 266 aa23.18■■□□□ 1.3
LHX3-202ENST00000371748 JAG2Q9Y219 1238 aa23.18■■□□□ 1.3
LHX3-202ENST00000371748 GYS1P13807 737 aa23.17■■□□□ 1.3
LHX3-202ENST00000371748 CDC27P30260 824 aa23.17■■□□□ 1.3
LHX3-202ENST00000371748 PPARAQ07869 468 aa23.17■■□□□ 1.3
LHX3-202ENST00000371748 GRAPQ13588 217 aa23.17■■□□□ 1.3
LHX3-202ENST00000371748 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
LHX3-202ENST00000371748 ZKSCAN3Q9BRR0 538 aa23.17■■□□□ 1.3
LHX3-202ENST00000371748 SMIM22K7EJ46 135 aa23.16■■□□□ 1.3
LHX3-202ENST00000371748 KRT27Q7Z3Y8 459 aa23.16■■□□□ 1.3
LHX3-202ENST00000371748 SGMS1Q86VZ5 419 aa23.16■■□□□ 1.3
LHX3-202ENST00000371748 R3HCC1Q9Y3T6 440 aaKnown RBP23.16■■□□□ 1.3
LHX3-202ENST00000371748 ZBTB43O43298 467 aa23.16■■□□□ 1.3
LHX3-202ENST00000371748 NSUN4Q96CB9 384 aaKnown RBP23.16■■□□□ 1.3
LHX3-202ENST00000371748 USP28Q96RU2 1077 aa23.16■■□□□ 1.3
LHX3-202ENST00000371748 ANKIB1Q9P2G1 1089 aa23.16■■□□□ 1.3
LHX3-202ENST00000371748 MECOMQ03112 1051 aa23.15■■□□□ 1.3
LHX3-202ENST00000371748 BICD2Q8TD16 824 aa23.15■■□□□ 1.3
LHX3-202ENST00000371748 LIFRP42702 1097 aa23.15■■□□□ 1.3
LHX3-202ENST00000371748 DACT1Q9NYF0 836 aa23.15■■□□□ 1.3
LHX3-202ENST00000371748 PRDX5P30044 214 aa23.14■■□□□ 1.3
LHX3-202ENST00000371748 CAMK4Q16566 473 aa23.14■■□□□ 1.3
LHX3-202ENST00000371748 FBXO18Q8NFZ0 1043 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms