RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.37□□□□□ -1.07
USP1-202ENST00000371146 TSPY2A6NKD2 308 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 MCAMP43121 646 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 PLCB2Q00722 1185 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 MECOMQ03112 1051 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 NFIAQ12857 509 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 FAM47AQ5JRC9 791 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 RSBN1LQ6PCB5 846 aaPredicted RBP8.37□□□□□ -1.07
USP1-202ENST00000371146 CDAN1Q8IWY9 1227 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 SMAP1Q8IYB5 467 aaPredicted RBP8.37□□□□□ -1.07
USP1-202ENST00000371146 SLC44A5Q8NCS7 719 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 NACAP1Q9BZK3 213 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 CABP5Q9NP86 173 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 INCENPQ9NQS7 918 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 RIPOR2Q9Y4F9 1068 aa8.37□□□□□ -1.07
USP1-202ENST00000371146 USP17L12C9JPN9 530 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 USP17L21D6R901 530 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 WDHD1O75717 1129 aaPredicted RBP8.36□□□□□ -1.07
USP1-202ENST00000371146 HOMER1Q86YM7 354 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 SIRT2Q8IXJ6 389 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 DYNLL2Q96FJ2 89 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 FAM227BQ96M60 508 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.36□□□□□ -1.07
USP1-202ENST00000371146 GLRX3O76003 335 aaKnown RBP8.36□□□□□ -1.07
USP1-202ENST00000371146 LRP10Q7Z4F1 713 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 SLF2Q8IX21 1173 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 TOPAZ1Q8N9V7 1692 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 RXRAP19793 462 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 GSE1Q14687 1217 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 LRRFIP1Q32MZ4 808 aaKnown RBP8.36□□□□□ -1.07
USP1-202ENST00000371146 CDC37L1Q7L3B6 337 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 PLCD4Q9BRC7 762 aa8.36□□□□□ -1.07
USP1-202ENST00000371146 CRNKL1Q9BZJ0 848 aaKnown RBP8.36□□□□□ -1.07
USP1-202ENST00000371146 SLC10A5Q5PT55 438 aa8.35□□□□□ -1.07
USP1-202ENST00000371146 UTP14CQ5TAP6 766 aaKnown RBP8.35□□□□□ -1.07
USP1-202ENST00000371146 ATG9AQ7Z3C6 839 aa8.35□□□□□ -1.07
USP1-202ENST00000371146 ZNF592Q92610 1267 aa8.35□□□□□ -1.07
USP1-202ENST00000371146 UPF3BQ9BZI7 483 aaKnown RBP8.35□□□□□ -1.07
USP1-202ENST00000371146 TAF1DQ9H5J8 278 aaPredicted RBP8.35□□□□□ -1.07
USP1-202ENST00000371146 PIH1D3Q9NQM4 214 aaKnown RBP8.35□□□□□ -1.07
USP1-202ENST00000371146 ZHX2Q9Y6X8 837 aa8.35□□□□□ -1.07
USP1-202ENST00000371146 WNT10BO00744 389 aa8.35□□□□□ -1.07
USP1-202ENST00000371146 CYP2D6P10635 497 aa8.35□□□□□ -1.07
USP1-202ENST00000371146 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
USP1-202ENST00000371146 TANGO6Q9C0B7 1094 aa8.35□□□□□ -1.07
USP1-202ENST00000371146 COPRSQ9NQ92 184 aa8.35□□□□□ -1.07
USP1-202ENST00000371146 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 SH3RF3Q8TEJ3 882 aaPredicted RBP8.34□□□□□ -1.07
USP1-202ENST00000371146 DOT1LQ8TEK3 1739 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 FAM193AP78312 1265 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 PNMA8AQ86V59 439 aaPredicted RBP8.34□□□□□ -1.07
USP1-202ENST00000371146 ZGPATQ8N5A5 531 aaKnown RBP8.34□□□□□ -1.07
USP1-202ENST00000371146 SGIP1Q9BQI5 828 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 GPRC5DQ9NZD1 345 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 RAB11FIP3O75154 756 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 CSF1RP07333 972 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 PDE1AP54750 535 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 C1QTNF8P60827 252 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 SPP2Q13103 211 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 AXDND1Q5T1B0 1012 aaPredicted RBP8.34□□□□□ -1.07
USP1-202ENST00000371146 GPC2Q8N158 579 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 SSH3Q8TE77 659 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 TBC1D22AQ8WUA7 517 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 GCC1Q96CN9 775 aa8.34□□□□□ -1.07
USP1-202ENST00000371146 ADARB2Q9NS39 739 aaKnown RBP8.34□□□□□ -1.07
USP1-202ENST00000371146 PARP4Q9UKK3 1724 aaKnown RBP8.34□□□□□ -1.08
USP1-202ENST00000371146 ERICH2A1L162 156 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 SORBS3O60504 671 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 CYP2E1P05181 493 aaPredicted RBP8.33□□□□□ -1.08
USP1-202ENST00000371146 TRMT2AQ8IZ69 625 aaKnown RBP8.33□□□□□ -1.08
USP1-202ENST00000371146 VTI1AQ96AJ9 217 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 ATP10DQ9P241 1426 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 AOC2O75106 756 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 TOMM70O94826 608 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 HOXA10P31260 410 aaPredicted RBP8.33□□□□□ -1.08
USP1-202ENST00000371146 INPP5BP32019 993 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 TNFAIP1Q13829 316 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 CERS5Q8N5B7 392 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 CDHR2Q9BYE9 1310 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 CPA1P15085 419 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 PDE6AP16499 860 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 CNGA1P29973 690 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 PRELPP51888 382 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 GSTO1P78417 241 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 NMIQ13287 307 aaPredicted RBP8.33□□□□□ -1.08
USP1-202ENST00000371146 ARMC9Q7Z3E5 817 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 CLMNQ96JQ2 1002 aa8.33□□□□□ -1.08
USP1-202ENST00000371146 hCG_1642624A0A1W2PR95 340 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 GPAA1O43292 621 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 TSPY3P0CV98 308 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 TSPY8P0CW00 308 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 SNAP25P60880 206 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 IRX3P78415 501 aaPredicted RBP8.32□□□□□ -1.08
USP1-202ENST00000371146 SUPT20HL1Q3ZLR7 823 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 CRY2Q49AN0 593 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 STRIP1Q5VSL9 837 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 ZSCAN25Q6NSZ9 544 aa8.32□□□□□ -1.08
USP1-202ENST00000371146 CHADLQ6NUI6 762 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms