RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 MTRF1LQ9UGC7 380 aaKnown RBP24.89■■□□□ 1.58
TM9SF3-201ENST00000371142 PRAG1Q86YV5 1406 aa24.89■■□□□ 1.57
TM9SF3-201ENST00000371142 CNGA4Q8IV77 575 aa24.89■■□□□ 1.57
TM9SF3-201ENST00000371142 ITGA6P23229 1130 aa24.89■■□□□ 1.57
TM9SF3-201ENST00000371142 VAV2P52735 878 aa24.89■■□□□ 1.57
TM9SF3-201ENST00000371142 TNNC1P63316 161 aa24.89■■□□□ 1.57
TM9SF3-201ENST00000371142 GTPBP4Q9BZE4 634 aaKnown RBP24.89■■□□□ 1.57
TM9SF3-201ENST00000371142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.89■■□□□ 1.57
TM9SF3-201ENST00000371142 FAM169AQ9Y6X4 670 aa24.89■■□□□ 1.57
TM9SF3-201ENST00000371142 EPB41P11171 864 aaKnown RBP24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 BIRC3Q13489 604 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 SEL1L2Q5TEA6 688 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 CPLX4Q7Z7G2 160 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 TTC6Q86TZ1 520 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 DUOX2Q9NRD8 1548 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 CCNT1O60563 726 aaKnown RBP24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 GCP02774 474 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 VPS16Q9H269 839 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 PDE4DQ08499 809 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 FCHSD1Q86WN1 690 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 CCDC160A6NGH7 325 aa24.88■■□□□ 1.57
TM9SF3-201ENST00000371142 NCKAP5LQ9HCH0 1330 aa24.87■■□□□ 1.57
TM9SF3-201ENST00000371142 ATP2A2P16615 1042 aaKnown RBP24.87■■□□□ 1.57
TM9SF3-201ENST00000371142 KLHDC4Q8TBB5 520 aa24.87■■□□□ 1.57
TM9SF3-201ENST00000371142 LEO1Q8WVC0 666 aaPredicted RBP24.87■■□□□ 1.57
TM9SF3-201ENST00000371142 MAPK8IP1Q9UQF2 711 aa24.87■■□□□ 1.57
TM9SF3-201ENST00000371142 SLC27A2O14975 620 aa24.87■■□□□ 1.57
TM9SF3-201ENST00000371142 MAP7D1Q3KQU3 841 aa24.87■■□□□ 1.57
TM9SF3-201ENST00000371142 MTUS1Q9ULD2 1270 aa24.87■■□□□ 1.57
TM9SF3-201ENST00000371142 UFL1O94874 794 aa24.86■■□□□ 1.57
TM9SF3-201ENST00000371142 FAM160A1Q05DH4 1040 aa24.86■■□□□ 1.57
TM9SF3-201ENST00000371142 CALCOCO2Q13137 446 aa24.86■■□□□ 1.57
TM9SF3-201ENST00000371142 FNBP1Q96RU3 617 aa24.86■■□□□ 1.57
TM9SF3-201ENST00000371142 KRT9P35527 623 aa24.86■■□□□ 1.57
TM9SF3-201ENST00000371142 TAF12Q16514 161 aa24.86■■□□□ 1.57
TM9SF3-201ENST00000371142 TNNI3KQ59H18 835 aa24.86■■□□□ 1.57
TM9SF3-201ENST00000371142 FPGT-TNNI3KV9GXZ4 949 aa24.86■■□□□ 1.57
TM9SF3-201ENST00000371142 NCOA5Q9HCD5 579 aaKnown RBP24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 NAP1L4Q99733 375 aaKnown RBP24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 CCDC169A6NNP5 214 aa24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 UAP1Q16222 522 aaPredicted RBP24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 OTUD7AQ8TE49 926 aaPredicted RBP24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 PLCD1P51178 756 aa24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 WDR44Q5JSH3 913 aa24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 TRAPPC3LQ5T215 181 aa24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 NBPF11Q86T75 865 aa24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 POLD1P28340 1107 aa24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 ZNF594Q96JF6 807 aaPredicted RBP24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 A2MP01023 1474 aa24.85■■□□□ 1.57
TM9SF3-201ENST00000371142 DEXIO95424 95 aa24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 CFAP58Q5T655 872 aa24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 IGSF22Q8N9C0 903 aa24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 PODXL2Q9NZ53 605 aa24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 A0A1W2PP64 1363 aa24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 AGTPBP1Q9UPW5 1226 aa24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 GJA3Q9Y6H8 435 aa24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 TBC1D8BQ0IIM8 1120 aa24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 SEC62Q99442 399 aaKnown RBP24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 DDX21Q9NR30 783 aaKnown RBP eCLIP24.84■■□□□ 1.57
TM9SF3-201ENST00000371142 RNASE9P60153 205 aaKnown RBP24.83■■□□□ 1.57
TM9SF3-201ENST00000371142 SYCP2Q9BX26 1530 aa24.83■■□□□ 1.57
TM9SF3-201ENST00000371142 NUP160Q12769 1436 aa24.83■■□□□ 1.57
TM9SF3-201ENST00000371142 XAGE2Q96GT9 111 aa24.83■■□□□ 1.57
TM9SF3-201ENST00000371142 EYA2O00167 538 aa24.83■■□□□ 1.57
TM9SF3-201ENST00000371142 V9GY48 417 aaPredicted RBP24.83■■□□□ 1.57
TM9SF3-201ENST00000371142 HIBADHP31937 336 aaKnown RBP24.83■■□□□ 1.57
TM9SF3-201ENST00000371142 DBNDD2Q9BQY9 259 aa24.83■■□□□ 1.57
TM9SF3-201ENST00000371142 PUM3Q15397 648 aaKnown RBP24.83■■□□□ 1.56
TM9SF3-201ENST00000371142 ANO1Q5XXA6 986 aa24.83■■□□□ 1.56
TM9SF3-201ENST00000371142 TNFAIP3P21580 790 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 TXKP42681 527 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 RILPL1Q5EBL4 403 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 CFAP157Q5JU67 520 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 CNBD1Q8NA66 436 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 EBAG9O00559 213 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 ZBTB7BO15156 539 aaPredicted RBP24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 SPOPO43791 374 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 ZYXQ15942 572 aaKnown RBP24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 PRDM1O75626 825 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 RASA3Q14644 834 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 ATL3Q6DD88 541 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 CEP57Q86XR8 500 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 CARD14Q9BXL6 1004 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 ZFYVE9O95405 1425 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 PPP2R3AQ06190 1150 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 BTG4Q9NY30 223 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 PLBD2Q8NHP8 589 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 WDR70Q9NW82 654 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 ANAPC4Q9UJX5 808 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 KCNH3Q9ULD8 1083 aa24.82■■□□□ 1.56
TM9SF3-201ENST00000371142 PROCA1Q8NCQ7 364 aaPredicted RBP24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 IP6K1Q92551 441 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 KIFAP3Q92845 792 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 UIMC1Q96RL1 719 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 SAMD15Q9P1V8 674 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 ODF2LQ9ULJ1 636 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 CCDC14Q49A88 953 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 MAEAQ7L5Y9 396 aa24.81■■□□□ 1.56
TM9SF3-201ENST00000371142 KIAA1524Q8TCG1 905 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms