RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PPP1R14CQ8TAE6 165 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 PPM1EQ8WY54 764 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 MTRF1LQ9UGC7 380 aaKnown RBP19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 DEXIO95424 95 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 ERCC6LQ2NKX8 1250 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 NOC4LQ9BVI4 516 aaKnown RBP19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 MTMR6Q9Y217 621 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 SAMM50Q9Y512 469 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 HOXB7P09629 217 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 TRMT2AQ8IZ69 625 aaKnown RBP19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 USP19O94966 1318 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 PPP1R2P41236 205 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 POTEDQ86YR6 584 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 DIS3L2Q8IYB7 885 aaKnown RBP19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 ZKSCAN3Q9BRR0 538 aa19.28■□□□□ 0.68
PTP4A1-201ENST00000370651 GPR161Q8N6U8 529 aaKnown RBP19.27■□□□□ 0.68
PTP4A1-201ENST00000370651 IQCGQ9H095 443 aaKnown RBP19.27■□□□□ 0.68
PTP4A1-201ENST00000370651 KLHDC4Q8TBB5 520 aa19.27■□□□□ 0.68
PTP4A1-201ENST00000370651 ZCRB1Q8TBF4 217 aaKnown RBP19.27■□□□□ 0.68
PTP4A1-201ENST00000370651 UBLCP1Q8WVY7 318 aaPredicted RBP19.27■□□□□ 0.68
PTP4A1-201ENST00000370651 JAKMIP2Q96AA8 810 aa19.27■□□□□ 0.68
PTP4A1-201ENST00000370651 KRT9P35527 623 aa19.27■□□□□ 0.68
PTP4A1-201ENST00000370651 RBM28Q9NW13 759 aaKnown RBP19.27■□□□□ 0.68
PTP4A1-201ENST00000370651 KBTBD3Q8NAB2 608 aa19.27■□□□□ 0.67
PTP4A1-201ENST00000370651 CHAMP1Q96JM3 812 aa19.27■□□□□ 0.67
PTP4A1-201ENST00000370651 DNAI2Q9GZS0 605 aa19.27■□□□□ 0.67
PTP4A1-201ENST00000370651 HPDP32754 393 aaPredicted RBP19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 RNMTO43148 476 aaKnown RBP19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 NR1I2O75469 434 aa19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 PTPRTO14522 1441 aa19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 EYA2O00167 538 aa19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 ZSCAN26Q16670 478 aa19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 HELBQ8NG08 1087 aaPredicted RBP19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 FERMT2Q96AC1 680 aa19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 GOLGA6BA6NDN3 693 aa19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 GNA11P29992 359 aa19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 USP37Q86T82 979 aa19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 RSRC1Q96IZ7 334 aaKnown RBP19.26■□□□□ 0.67
PTP4A1-201ENST00000370651 ZBTB16Q05516 673 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 MRFAP1L1Q96HT8 127 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 MKRN1Q9UHC7 482 aaKnown RBP19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 TNRQ92752 1358 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 MBD4O95243 580 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 HOXC9P31274 260 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 KIAA1468Q9P260 1216 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 ATP2A1O14983 1001 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 APPBP2Q92624 585 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 MRVI1Q9Y6F6 885 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 UHRF1BP1LA0JNW5 1464 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 ADGRL2O95490 1459 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 PLCD1P51178 756 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 MXRA7P84157 204 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 PAK1Q13153 545 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 POSTNQ15063 836 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 PLCD3Q8N3E9 789 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 CCDC26Q8TAB7 109 aa19.25■□□□□ 0.67
PTP4A1-201ENST00000370651 KRT40Q6A162 431 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 ADALQ6DHV7 355 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 RRP36Q96EU6 259 aaKnown RBP19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 MAPK8IP1Q9UQF2 711 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 TMEM110-MUSTN1A8MSY1 372 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 TNNI2P48788 182 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 BRD3Q15059 726 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 LRRC8AQ8IWT6 810 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 PYCARDQ9ULZ3 195 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 YTHDC2Q9H6S0 1430 aaKnown RBP19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 NCKAP5LQ9HCH0 1330 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 IBTKQ9P2D0 1353 aaPredicted RBP19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 RGS12O14924 1447 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 ETF1P62495 437 aaKnown RBP19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 SECISBP2LQ93073 1101 aaKnown RBP19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 CCDC25Q86WR0 208 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 RGS22Q8NE09 1264 aa19.24■□□□□ 0.67
PTP4A1-201ENST00000370651 KIAA0232Q92628 1395 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 CALCOCO2Q13137 446 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 UTP14CQ5TAP6 766 aaKnown RBP19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 TTC6Q86TZ1 520 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 IFT20Q8IY31 132 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 CSGALNACT2Q8N6G5 542 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 KCNK9Q9NPC2 374 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 PDE4DQ08499 809 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 HS2ST1Q7LGA3 356 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 METTL22Q9BUU2 404 aaPredicted RBP19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 NUP58Q9BVL2 599 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
PTP4A1-201ENST00000370651 A0A1B0GUA9 196 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 TRAF5O00463 557 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 RAPGEF1Q13905 1077 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 NAA25Q14CX7 972 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 SV2BQ7L1I2 683 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 SLF1Q9BQI6 1058 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 SETDB1Q15047 1291 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 LONRF3Q496Y0 759 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 GSTA5Q7RTV2 222 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 RABEP2Q9H5N1 569 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 TAB2Q9NYJ8 693 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 IRS4O14654 1257 aaPredicted RBP19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 GPAA1O43292 621 aa19.22■□□□□ 0.67
PTP4A1-201ENST00000370651 CD2BP2O95400 341 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms