RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 BCRP11274 1271 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 ERCC3P19447 782 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 PSMA6P60900 246 aaKnown RBP4.64□□□□□ -1.67
MCF2-202ENST00000370573 GRIN2CQ14957 1233 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 FIGNL1Q6PIW4 674 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 NLRP8Q86W28 1048 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 ANKMY2Q8IV38 441 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 GALNT6Q8NCL4 622 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 NEUROD4Q9HD90 331 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 COL22A1Q8NFW1 1626 aaPredicted RBP4.64□□□□□ -1.67
MCF2-202ENST00000370573 RGPD2P0DJD1 1756 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 CAMTA1Q9Y6Y1 1673 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 FAM196BA6NMK8 535 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 HSPA1LP34931 641 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 TMPOP42166 694 aaKnown RBP4.63□□□□□ -1.67
MCF2-202ENST00000370573 TNP2Q05952 138 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 RHPN1Q8TCX5 695 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 HSH2DQ96JZ2 352 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 PHACTR1Q9C0D0 580 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 PRDM11Q9NQV5 511 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 STRN4Q9NRL3 753 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 KDRP35968 1356 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 CENPBP07199 599 aaPredicted RBP4.63□□□□□ -1.67
MCF2-202ENST00000370573 C7orf43Q8WVR3 580 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 CLP1Q92989 425 aaKnown RBP4.63□□□□□ -1.67
MCF2-202ENST00000370573 GGA1Q9UJY5 639 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 CHMP3Q9Y3E7 222 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 DNMT3AQ9Y6K1 912 aaPredicted RBP4.63□□□□□ -1.67
MCF2-202ENST00000370573 CNTNAP5Q8WYK1 1306 aa4.63□□□□□ -1.67
MCF2-202ENST00000370573 SHISA8B8ZZ34 492 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 IRS1P35568 1242 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 MAP2K3P46734 347 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 RIPK4P57078 832 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 NFE2L2Q16236 605 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 ZNF280CQ8ND82 737 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 PNNQ9H307 717 aaKnown RBP4.62□□□□□ -1.67
MCF2-202ENST00000370573 ENAMQ9NRM1 1142 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 LMO7Q8WWI1 1683 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 MAPK8IP3Q9UPT6 1336 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 NCAPD2Q15021 1401 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 ABCC6O95255 1503 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 NEURL1BA8MQ27 555 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 M0R2N6 131 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 OIP5O43482 229 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 RECKO95980 971 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 ATP2B4P23634 1241 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 PCBP4P57723 403 aaKnown RBP4.62□□□□□ -1.67
MCF2-202ENST00000370573 MTHFSDQ2M296 383 aaKnown RBP4.62□□□□□ -1.67
MCF2-202ENST00000370573 ALDH16A1Q8IZ83 802 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 NLRP2Q9NX02 1062 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 BIN2Q9UBW5 565 aaPredicted RBP4.62□□□□□ -1.67
MCF2-202ENST00000370573 JCADQ9P266 1359 aa4.62□□□□□ -1.67
MCF2-202ENST00000370573 FBXO33Q7Z6M2 555 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 TRMT2AQ8IZ69 625 aaKnown RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 NGEFQ8N5V2 710 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 RRAGCQ9HB90 399 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 BTG4Q9NY30 223 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 WDR17Q8IZU2 1322 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 SMARCA5O60264 1052 aaPredicted RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 AMPD1P23109 780 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 GSK3AP49840 483 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 SNRPNP63162 240 aaKnown RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 SLFN5Q08AF3 891 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 SFSWAPQ12872 951 aaKnown RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 PDE3BQ13370 1112 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 RAB44Q7Z6P3 723 aaPredicted RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 FAM200AQ8TCP9 573 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 EDARADDQ8WWZ3 215 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 THUMPD2Q9BTF0 503 aaKnown RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 C2orf49Q9BVC5 232 aaPredicted RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 PRR12Q9ULL5 1215 aa4.61□□□□□ -1.67
MCF2-202ENST00000370573 COL5A2P05997 1499 aaPredicted RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 FAM208AQ9UK61 1670 aaKnown RBP4.61□□□□□ -1.67
MCF2-202ENST00000370573 EVA1CP58658 441 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 RASSF7Q02833 373 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 DCTN1Q14203 1278 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 ECM1Q16610 540 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 WDR63Q8IWG1 891 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 DRC1Q96MC2 740 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 CEP63Q96MT8 703 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 ANO2Q9NQ90 1003 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 MARK1Q9P0L2 795 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 KLF15Q9UIH9 416 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 COL14A1Q05707 1796 aaKnown RBP4.6□□□□□ -1.67
MCF2-202ENST00000370573 DLG5Q8TDM6 1919 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 NEFMP07197 916 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 DUSP27Q5VZP5 1158 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 TOM1L2Q6ZVM7 507 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 SUSD3Q96L08 255 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 CARD10Q9BWT7 1032 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 LRP6O75581 1613 aa4.6□□□□□ -1.67
MCF2-202ENST00000370573 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 GDF11O95390 407 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 FAM157BP0CG42 384 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 ZNF211Q13398 564 aaPredicted RBP4.59□□□□□ -1.67
MCF2-202ENST00000370573 PLEKHO1Q53GL0 409 aaPredicted RBP4.59□□□□□ -1.67
MCF2-202ENST00000370573 MCM10Q7L590 875 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 GOLGA6L1Q8N7Z2 621 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 SREK1Q8WXA9 508 aaKnown RBP4.59□□□□□ -1.67
MCF2-202ENST00000370573 PRIMPOLQ96LW4 560 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms