RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 YY1AP1Q9H869 796 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 ECHDC1Q9NTX5 307 aa9.61□□□□□ -0.87
LCA5-201ENST00000369846 ADGBQ8N7X0 1667 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 ATICP31939 592 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 TAF11Q15544 211 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 ANKRD42Q8N9B4 389 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 CCDC26Q8TAB7 109 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 SREK1Q8WXA9 508 aaKnown RBP9.6□□□□□ -0.87
LCA5-201ENST00000369846 SPDL1Q96EA4 605 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 VPS16Q9H269 839 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 hCG_2014768A0A024R1R8 64 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 CREB3O43889 395 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 MYL6BP14649 208 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 AMPD3Q01432 767 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 MTX1Q13505 466 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 UAP1Q16222 522 aaPredicted RBP9.6□□□□□ -0.87
LCA5-201ENST00000369846 WWC2Q6AWC2 1192 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 FBXO38Q6PIJ6 1188 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 LMBR1Q8WVP7 490 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 NAPBQ9H115 298 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 ZC4H2Q9NQZ6 224 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 FAM135AQ9P2D6 1515 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 KIAA0556O60303 1618 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 CEP104O60308 925 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 RNF40O75150 1001 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 RASSF2P50749 326 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 ACTN3Q08043 901 aaPredicted RBP9.6□□□□□ -0.87
LCA5-201ENST00000369846 CFAP157Q5JU67 520 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 FBXO18Q8NFZ0 1043 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 JARID2Q92833 1246 aaPredicted RBP9.6□□□□□ -0.87
LCA5-201ENST00000369846 EPSTI1Q96J88 318 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 SLF1Q9BQI6 1058 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 DESI2Q9BSY9 194 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 RAB34Q9BZG1 259 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 EXOC1Q9NV70 894 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 LARSQ9P2J5 1176 aaKnown RBP9.6□□□□□ -0.87
LCA5-201ENST00000369846 PLEKHH2Q8IVE3 1493 aa9.6□□□□□ -0.87
LCA5-201ENST00000369846 TARBP1Q13395 1621 aaKnown RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 KLF18A0A0U1RQI7 1052 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 FCHSD2O94868 740 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 ERCC5P28715 1186 aaPredicted RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 ARL1P40616 181 aaPredicted RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 PDE1AP54750 535 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 GPIHBP1Q8IV16 184 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 STRN4Q9NRL3 753 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 RMND1Q9NWS8 449 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 CLCN6P51797 869 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 CALR3Q96L12 384 aaKnown RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 ALG1Q9BT22 464 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 RBM8AQ9Y5S9 174 aaKnown RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 CPA1P15085 419 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 TRMT1LQ7Z2T5 733 aaKnown RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 CHAMP1Q96JM3 812 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 XPO4Q9C0E2 1151 aaKnown RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 GNL3LQ9NVN8 582 aaKnown RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 KLHL14Q9P2G3 628 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 IMPACTQ9P2X3 320 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 ABCF2Q9UG63 623 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 EIF4E1BA6NMX2 242 aaKnown RBP9.59□□□□□ -0.87
LCA5-201ENST00000369846 KRT9P35527 623 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 METAP2P50579 478 aaKnown RBP eCLIP9.59□□□□□ -0.87
LCA5-201ENST00000369846 CFAP61Q8NHU2 1237 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 EVI5LQ96CN4 794 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 CALML4Q96GE6 196 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 SH3GL3Q99963 347 aa9.59□□□□□ -0.87
LCA5-201ENST00000369846 ENO4A6NNW6 628 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 TRIM66O15016 1216 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 DNAJC8O75937 253 aaPredicted RBP9.58□□□□□ -0.88
LCA5-201ENST00000369846 IFIT1P09914 478 aaKnown RBP9.58□□□□□ -0.88
LCA5-201ENST00000369846 PNMA6AP0CW24 399 aaPredicted RBP9.58□□□□□ -0.88
LCA5-201ENST00000369846 PRPHP41219 470 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 APOBRQ0VD83 1088 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 PRPF38AQ8NAV1 312 aaKnown RBP9.58□□□□□ -0.88
LCA5-201ENST00000369846 ZCCHC17Q9NP64 241 aaKnown RBP9.58□□□□□ -0.88
LCA5-201ENST00000369846 SCOCQ9UIL1 159 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 ADAM21Q9UKJ8 722 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 ATP6V0A2Q9Y487 856 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 BICDL2A1A5D9 508 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 RANBP6O60518 1105 aaKnown RBP9.58□□□□□ -0.88
LCA5-201ENST00000369846 CD2BP2O95400 341 aaKnown RBP9.58□□□□□ -0.88
LCA5-201ENST00000369846 STMN1P16949 149 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 ATP5DP30049 168 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 TMEM266Q2M3C6 531 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 ANKRD24Q8TF21 1146 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 ATG3Q9NT62 314 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 NRBP1Q9UHY1 535 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 ADAMTS12P58397 1594 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 ACTN4O43707 911 aaKnown RBP9.58□□□□□ -0.88
LCA5-201ENST00000369846 HSP90AA5PQ58FG0 334 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 JAKMIP2Q96AA8 810 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 HAUS1Q96CS2 278 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 CLSTN2Q9H4D0 955 aa9.58□□□□□ -0.88
LCA5-201ENST00000369846 CTNNA1P35221 906 aaKnown RBP9.57□□□□□ -0.88
LCA5-201ENST00000369846 NLRP6P59044 892 aa9.57□□□□□ -0.88
LCA5-201ENST00000369846 TAOK1Q7L7X3 1001 aa9.57□□□□□ -0.88
LCA5-201ENST00000369846 RAB3IPQ96QF0 476 aaPredicted RBP9.57□□□□□ -0.88
LCA5-201ENST00000369846 PBRM1Q86U86 1689 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms