RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 ANO10Q9NW15 660 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 TACC3Q9Y6A5 838 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 SHANK3Q9BYB0 1731 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 CCDC69A6NI79 296 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 WDHD1O75717 1129 aaPredicted RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 UQCRFS1P1P0C7P4 283 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 IARSP41252 1262 aaKnown RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 ITPK1Q13572 414 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 PTPN21Q16825 1174 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 SLC4A8Q2Y0W8 1093 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 CEP57L1Q8IYX8 460 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 SLC12A7Q9Y666 1083 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 IGHMBP2P38935 993 aaKnown RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 GYG1P46976 350 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 SIK1P57059 783 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 EVCP57679 992 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 INTS5Q6P9B9 1019 aaKnown RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 KCNJ14Q9UNX9 436 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 JAG2Q9Y219 1238 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 hCG_1642624A0A1W2PR95 340 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 CTAGE5O15320 804 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 ZNF202O95125 648 aa13.36□□□□□ -0.27
RAB39B-201ENST00000369454 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 CPLX2Q6PUV4 134 aaKnown RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 TRMT1Q9NXH9 659 aaKnown RBP13.36□□□□□ -0.27
RAB39B-201ENST00000369454 TCRBV5S4A2TA0A5A2 114 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 SMC2O95347 1197 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 GUCY1A2P33402 732 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
RAB39B-201ENST00000369454 CHAF1AQ13111 956 aaPredicted RBP13.35□□□□□ -0.27
RAB39B-201ENST00000369454 TRIM29Q14134 588 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 KCNG4Q8TDN1 519 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 RAI14Q9P0K7 980 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 GOLGB1Q14789 3259 aaKnown RBP13.35□□□□□ -0.27
RAB39B-201ENST00000369454 ZMYM6O95789 1325 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 MROH5Q6ZUA9 1318 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 RANBP6O60518 1105 aaKnown RBP13.35□□□□□ -0.27
RAB39B-201ENST00000369454 SLC3A2P08195 630 aaKnown RBP13.35□□□□□ -0.27
RAB39B-201ENST00000369454 PFKFB1P16118 471 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
RAB39B-201ENST00000369454 TERF1P54274 439 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 MFSD6Q6ZSS7 791 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 MYRIPQ8NFW9 859 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 SPTLC3Q9NUV7 552 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 PATL2C9JE40 543 aaKnown RBP13.35□□□□□ -0.27
RAB39B-201ENST00000369454 DYNC1I1O14576 645 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 PRDM1O75626 825 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 CHRNDQ07001 517 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 TPD52L1Q16890 204 aaPredicted RBP13.35□□□□□ -0.27
RAB39B-201ENST00000369454 IGDCC4Q8TDY8 1250 aa13.35□□□□□ -0.27
RAB39B-201ENST00000369454 MROH7-TTC4A0A0A0MT08 1334 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 CYP2D7A0A087X1C5 515 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 ERVV-1B6SEH8 477 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
RAB39B-201ENST00000369454 TPM3P06753 285 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 FGFR2P21802 821 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 LY9Q9HBG7 655 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 GSG1L2A8MUP6 293 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 CYP7A1P22680 504 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
RAB39B-201ENST00000369454 KIAA1468Q9P260 1216 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
RAB39B-201ENST00000369454 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 POLR3EQ9NVU0 708 aa13.34□□□□□ -0.27
RAB39B-201ENST00000369454 BTBD18B2RXH4 712 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 PIP4K2BP78356 416 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 ADGRA1Q86SQ6 560 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 USP27XA6NNY8 438 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 SYKP43405 635 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 PNOCQ13519 176 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 AKNAD1Q5T1N1 836 aa13.33□□□□□ -0.28
RAB39B-201ENST00000369454 CDKL5O76039 1030 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 CAMTA2O94983 1202 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 YEATS4O95619 227 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 TNNT1P13805 278 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 SSRP1Q08945 709 aaKnown RBP13.32□□□□□ -0.28
RAB39B-201ENST00000369454 AXDND1Q5T1B0 1012 aaPredicted RBP13.32□□□□□ -0.28
RAB39B-201ENST00000369454 FBXL16Q8N461 479 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 PDILTQ8N807 584 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 NAT10Q9H0A0 1025 aaKnown RBP13.32□□□□□ -0.28
RAB39B-201ENST00000369454 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
RAB39B-201ENST00000369454 ITGB4P16144 1822 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 SKILP12757 684 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 NACAP1Q9BZK3 213 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 IFNKQ9P0W0 207 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 AKAP11Q9UKA4 1901 aa13.32□□□□□ -0.28
RAB39B-201ENST00000369454 WTAPQ15007 396 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms