RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
SIM1-202ENST00000369208 SPDYE3A6NKU9 549 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 FLOT1O75955 427 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 P3H4Q92791 437 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 TRPC3Q13507 836 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 ACBD5Q5T8D3 534 aaPredicted RBP11.28□□□□□ -0.6
SIM1-202ENST00000369208 C19orf44Q9H6X5 657 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
SIM1-202ENST00000369208 NOD1Q9Y239 953 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 GOLGA6BA6NDN3 693 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 PCYT1AP49585 367 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 IQCDQ96DY2 449 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 IKBKGQ9Y6K9 419 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.28□□□□□ -0.6
SIM1-202ENST00000369208 CDK13Q14004 1512 aaKnown RBP11.28□□□□□ -0.6
SIM1-202ENST00000369208 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
SIM1-202ENST00000369208 CALM1P0DP23 149 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 CALM2P0DP24 149 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 CALM3P0DP25 149 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 TCERG1LQ5VWI1 586 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 CCDC170Q8IYT3 715 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 TMOD4Q9NZQ9 345 aa11.28□□□□□ -0.6
SIM1-202ENST00000369208 GCFC2P16383 781 aaKnown RBP11.28□□□□□ -0.6
SIM1-202ENST00000369208 MTIF2P46199 727 aaKnown RBP11.27□□□□□ -0.6
SIM1-202ENST00000369208 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.6
SIM1-202ENST00000369208 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.6
SIM1-202ENST00000369208 EXOC6BQ9Y2D4 811 aa11.27□□□□□ -0.6
SIM1-202ENST00000369208 RASIP1Q5U651 963 aa11.27□□□□□ -0.6
SIM1-202ENST00000369208 CALR3Q96L12 384 aaKnown RBP11.27□□□□□ -0.6
SIM1-202ENST00000369208 STX8Q9UNK0 236 aa11.27□□□□□ -0.6
SIM1-202ENST00000369208 GRAMD4Q6IC98 578 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 SYT10Q6XYQ8 523 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 CNNM3Q8NE01 707 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 OSBPL9Q96SU4 736 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 ECHDC1Q9NTX5 307 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.27□□□□□ -0.61
SIM1-202ENST00000369208 FLIIQ13045 1269 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 PRPF40BQ6NWY9 871 aaKnown RBP11.27□□□□□ -0.61
SIM1-202ENST00000369208 NME9Q86XW9 330 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 ZSCAN16Q9H4T2 348 aaPredicted RBP11.27□□□□□ -0.61
SIM1-202ENST00000369208 HAUS2Q9NVX0 235 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 FRMD4BQ9Y2L6 1034 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 KRT83P78385 493 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.61
SIM1-202ENST00000369208 CCDC77Q9BR77 488 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 TDRD12Q587J7 1177 aaKnown RBP11.27□□□□□ -0.61
SIM1-202ENST00000369208 BAG1Q99933 345 aaPredicted RBP11.27□□□□□ -0.61
SIM1-202ENST00000369208 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
SIM1-202ENST00000369208 ARAP1Q96P48 1450 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 BMP2KLQ5H9B9 411 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 JADE2Q9NQC1 790 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 EXOC1Q9NV70 894 aa11.27□□□□□ -0.61
SIM1-202ENST00000369208 NIP7Q9Y221 180 aaKnown RBP eCLIP11.27□□□□□ -0.61
SIM1-202ENST00000369208 COG7P83436 770 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 TCIRG1Q13488 830 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 TAOK1Q7L7X3 1001 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 UBE3BQ7Z3V4 1068 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 STAG1Q8WVM7 1258 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 SLC5A4Q9NY91 659 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 METAP2P50579 478 aaKnown RBP eCLIP11.26□□□□□ -0.61
SIM1-202ENST00000369208 ISM2Q6H9L7 571 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 KRT86O43790 486 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 CEBPAP49715 358 aaPredicted RBP11.26□□□□□ -0.61
SIM1-202ENST00000369208 WTAPQ15007 396 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 IFIT1BQ5T764 474 aaKnown RBP11.26□□□□□ -0.61
SIM1-202ENST00000369208 ZNF518AQ6AHZ1 1483 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 CYLC1P35663 651 aaPredicted RBP11.26□□□□□ -0.61
SIM1-202ENST00000369208 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
SIM1-202ENST00000369208 DDX23Q9BUQ8 820 aaKnown RBP11.26□□□□□ -0.61
SIM1-202ENST00000369208 KDM5BQ9UGL1 1544 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
SIM1-202ENST00000369208 CCDC14Q49A88 953 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 JAKMIP2Q96AA8 810 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 DDX41Q9UJV9 622 aaKnown RBP11.25□□□□□ -0.61
SIM1-202ENST00000369208 RANBP1P43487 201 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 IDI1Q13907 227 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 RUFY3Q7L099 469 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 VAT1LQ9HCJ6 419 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 TRPM2O94759 1503 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 CALML3P27482 149 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 BAG6P46379 1132 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 SLC8A3P57103 927 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 SLC30A9Q6PML9 568 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 PPP1R21Q6ZMI0 780 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 BAIAP2L1Q9UHR4 511 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 IDEP14735 1019 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 PDE1CQ14123 709 aaPredicted RBP11.25□□□□□ -0.61
SIM1-202ENST00000369208 UBE4AQ14139 1066 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 CLUL1Q15846 466 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 SCINQ9Y6U3 715 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 ABCC5O15440 1437 aa11.25□□□□□ -0.61
SIM1-202ENST00000369208 TEX9Q8N6V9 391 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms