RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ECE2O60344 883 aa23.05■■□□□ 1.28
CHTOP-204ENST00000368694 LDHCP07864 332 aa23.05■■□□□ 1.28
CHTOP-204ENST00000368694 ANKRD1Q15327 319 aa23.05■■□□□ 1.28
CHTOP-204ENST00000368694 CRNKL1Q9BZJ0 848 aaKnown RBP23.05■■□□□ 1.28
CHTOP-204ENST00000368694 FGD1P98174 961 aa23.04■■□□□ 1.28
CHTOP-204ENST00000368694 MROH7-TTC4A0A0A0MT08 1334 aa23.04■■□□□ 1.28
CHTOP-204ENST00000368694 PPIP5K2O43314 1243 aa23.04■■□□□ 1.28
CHTOP-204ENST00000368694 KIAA2012Q0VF49 1180 aa23.04■■□□□ 1.28
CHTOP-204ENST00000368694 DHX32Q7L7V1 743 aaKnown RBP23.04■■□□□ 1.28
CHTOP-204ENST00000368694 RALYLQ86SE5 291 aaKnown RBP23.04■■□□□ 1.28
CHTOP-204ENST00000368694 NBPF3Q9H094 633 aa23.04■■□□□ 1.28
CHTOP-204ENST00000368694 TRDNQ13061 729 aa23.03■■□□□ 1.28
CHTOP-204ENST00000368694 TBC1D10CQ8IV04 446 aa23.03■■□□□ 1.28
CHTOP-204ENST00000368694 SLF2Q8IX21 1173 aa23.03■■□□□ 1.28
CHTOP-204ENST00000368694 BAG3O95817 575 aa23.02■■□□□ 1.28
CHTOP-204ENST00000368694 PTGER2P43116 358 aa23.02■■□□□ 1.28
CHTOP-204ENST00000368694 NCOA7Q8NI08 942 aa23.02■■□□□ 1.28
CHTOP-204ENST00000368694 LRRC2Q9BYS8 371 aa23.02■■□□□ 1.28
CHTOP-204ENST00000368694 SCN9AQ15858 1988 aa23.02■■□□□ 1.28
CHTOP-204ENST00000368694 F8W031 263 aaPredicted RBP23.02■■□□□ 1.28
CHTOP-204ENST00000368694 DALRD3Q5D0E6 543 aaKnown RBP23.02■■□□□ 1.28
CHTOP-204ENST00000368694 SOGA3Q5TF21 947 aa23.02■■□□□ 1.28
CHTOP-204ENST00000368694 Q6ZUG5 572 aa23.02■■□□□ 1.28
CHTOP-204ENST00000368694 ALDH8A1Q9H2A2 487 aaPredicted RBP23.02■■□□□ 1.28
CHTOP-204ENST00000368694 TIAM2Q8IVF5 1701 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 CTDSPL2Q05D32 466 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 CUL4AQ13619 759 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 TOB2Q14106 344 aaPredicted RBP23.01■■□□□ 1.27
CHTOP-204ENST00000368694 MXD3Q9BW11 206 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 KCNQ5Q9NR82 932 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 SUGT1Q9Y2Z0 365 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 CD2APQ9Y5K6 639 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 CHST3Q7LGC8 479 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 CERS5Q8N5B7 392 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 ZSCAN31Q96LW9 406 aaPredicted RBP23.01■■□□□ 1.27
CHTOP-204ENST00000368694 PSMD1Q99460 953 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 CHMP5Q9NZZ3 219 aa23.01■■□□□ 1.27
CHTOP-204ENST00000368694 MINDY4BA8MYZ0 360 aa23■■□□□ 1.27
CHTOP-204ENST00000368694 TPCN1Q9ULQ1 816 aa23■■□□□ 1.27
CHTOP-204ENST00000368694 LARGE1O95461 756 aa22.99■■□□□ 1.27
CHTOP-204ENST00000368694 BTDP43251 543 aa22.99■■□□□ 1.27
CHTOP-204ENST00000368694 GIMAP6Q6P9H5 292 aa22.99■■□□□ 1.27
CHTOP-204ENST00000368694 SH2B1Q9NRF2 756 aaPredicted RBP22.99■■□□□ 1.27
CHTOP-204ENST00000368694 ATP8A2Q9NTI2 1148 aa22.99■■□□□ 1.27
CHTOP-204ENST00000368694 TTF2Q9UNY4 1162 aaKnown RBP22.99■■□□□ 1.27
CHTOP-204ENST00000368694 LAMB1P07942 1786 aa22.99■■□□□ 1.27
CHTOP-204ENST00000368694 MCM5P33992 734 aa22.99■■□□□ 1.27
CHTOP-204ENST00000368694 DDIT3P35638 169 aa22.99■■□□□ 1.27
CHTOP-204ENST00000368694 PPARAQ07869 468 aa22.99■■□□□ 1.27
CHTOP-204ENST00000368694 SH3RF3Q8TEJ3 882 aaPredicted RBP22.99■■□□□ 1.27
CHTOP-204ENST00000368694 USP5P45974 858 aa22.98■■□□□ 1.27
CHTOP-204ENST00000368694 EXOSC10Q01780 885 aaKnown RBP22.98■■□□□ 1.27
CHTOP-204ENST00000368694 STRIP1Q5VSL9 837 aa22.98■■□□□ 1.27
CHTOP-204ENST00000368694 CERS3Q8IU89 383 aa22.98■■□□□ 1.27
CHTOP-204ENST00000368694 MB21D2Q8IYB1 491 aaPredicted RBP22.98■■□□□ 1.27
CHTOP-204ENST00000368694 STK11IPQ8N1F8 1099 aa22.98■■□□□ 1.27
CHTOP-204ENST00000368694 BRF1Q92994 677 aa22.98■■□□□ 1.27
CHTOP-204ENST00000368694 CDK5RAP2Q96SN8 1893 aa22.98■■□□□ 1.27
CHTOP-204ENST00000368694 DCP1AQ9NPI6 582 aaPredicted RBP22.98■■□□□ 1.27
CHTOP-204ENST00000368694 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
CHTOP-204ENST00000368694 ZNF646O15015 1829 aaPredicted RBP22.98■■□□□ 1.27
CHTOP-204ENST00000368694 NEDD4P46934 1319 aa22.98■■□□□ 1.27
CHTOP-204ENST00000368694 PPP4CP60510 307 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 ME3Q16798 604 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 AKNAD1Q5T1N1 836 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 MFSD6Q6ZSS7 791 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 INTS4Q96HW7 963 aaKnown RBP22.97■■□□□ 1.27
CHTOP-204ENST00000368694 CWC22Q9HCG8 908 aaKnown RBP22.97■■□□□ 1.27
CHTOP-204ENST00000368694 NAV1Q8NEY1 1877 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 USP17L3A6NCW0 530 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 USP17L4A6NCW7 530 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 B4E1Z4 1266 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 USP17L1Q7RTZ2 530 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 LARGE2Q8N3Y3 721 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 FAM163AQ96GL9 167 aaPredicted RBP22.97■■□□□ 1.27
CHTOP-204ENST00000368694 TOMM22Q9NS69 142 aa22.97■■□□□ 1.27
CHTOP-204ENST00000368694 GPR75-ASB3A0A0A6YYF3 556 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 PRC1O43663 620 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 CNNM2Q9H8M5 875 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 INCENPQ9NQS7 918 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 CIZ1Q9ULV3 898 aaPredicted RBP22.96■■□□□ 1.27
CHTOP-204ENST00000368694 GAKO14976 1311 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 PLCG2P16885 1265 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 SCNN1DP51172 638 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 CTR9Q6PD62 1173 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 CCDC83Q8IWF9 413 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 STAG1Q8WVM7 1258 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 DAGLAQ9Y4D2 1042 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 ADAMTSL1Q8N6G6 1762 aa22.96■■□□□ 1.27
CHTOP-204ENST00000368694 USP17L12C9JPN9 530 aa22.95■■□□□ 1.26
CHTOP-204ENST00000368694 USP17L21D6R901 530 aa22.95■■□□□ 1.26
CHTOP-204ENST00000368694 RRP12Q5JTH9 1297 aaKnown RBP22.95■■□□□ 1.26
CHTOP-204ENST00000368694 DACT2Q5SW24 774 aa22.95■■□□□ 1.26
CHTOP-204ENST00000368694 RNF41Q9H4P4 317 aaPredicted RBP22.95■■□□□ 1.26
CHTOP-204ENST00000368694 BCS1LQ9Y276 419 aa22.95■■□□□ 1.26
CHTOP-204ENST00000368694 FER1L6Q2WGJ9 1857 aa22.95■■□□□ 1.26
CHTOP-204ENST00000368694 PSME4Q14997 1843 aa22.95■■□□□ 1.26
CHTOP-204ENST00000368694 CYP2D7A0A087X1C5 515 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 STK3Q13188 491 aa22.94■■□□□ 1.26
CHTOP-204ENST00000368694 NECAB1Q8N987 351 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms