RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TTF2Q9UNY4 1162 aaKnown RBP12.27□□□□□ -0.44
TPM3-210ENST00000368530 PTPN22Q9Y2R2 807 aa12.27□□□□□ -0.44
TPM3-210ENST00000368530 CENPFP49454 3210 aa12.27□□□□□ -0.45
TPM3-210ENST00000368530 CEP85Q6P2H3 762 aa12.27□□□□□ -0.45
TPM3-210ENST00000368530 ANKRD44Q8N8A2 993 aa12.27□□□□□ -0.45
TPM3-210ENST00000368530 OPTNQ96CV9 577 aa12.27□□□□□ -0.45
TPM3-210ENST00000368530 LNPKQ9C0E8 428 aa12.27□□□□□ -0.45
TPM3-210ENST00000368530 SRCIN1Q9C0H9 1055 aa12.27□□□□□ -0.45
TPM3-210ENST00000368530 BCL11AQ9H165 835 aa12.27□□□□□ -0.45
TPM3-210ENST00000368530 ELP3Q9H9T3 547 aa12.27□□□□□ -0.45
TPM3-210ENST00000368530 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
TPM3-210ENST00000368530 GNAI2P04899 355 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 CRKP46108 304 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 RABL6Q3YEC7 729 aaPredicted RBP12.26□□□□□ -0.45
TPM3-210ENST00000368530 TAF7LQ5H9L4 462 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 ANKRD45Q5TZF3 282 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 BRI3BPQ8WY22 251 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 ARMC5Q96C12 935 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 ERO1AQ96HE7 468 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 TMEM39BQ9GZU3 492 aa12.26□□□□□ -0.45
TPM3-210ENST00000368530 GNAI3P08754 354 aa12.25□□□□□ -0.45
TPM3-210ENST00000368530 SP3Q02447 781 aa12.25□□□□□ -0.45
TPM3-210ENST00000368530 NUCB1Q02818 461 aa12.25□□□□□ -0.45
TPM3-210ENST00000368530 TNFAIP1Q13829 316 aa12.25□□□□□ -0.45
TPM3-210ENST00000368530 LRRC24Q50LG9 513 aa12.25□□□□□ -0.45
TPM3-210ENST00000368530 RPAP2Q8IXW5 612 aaPredicted RBP12.25□□□□□ -0.45
TPM3-210ENST00000368530 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.25□□□□□ -0.45
TPM3-210ENST00000368530 BRCA2P51587 3418 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 TCP10L2B9ZVM9 353 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 APBB1O00213 710 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 UBTFL1P0CB47 393 aaPredicted RBP12.24□□□□□ -0.45
TPM3-210ENST00000368530 MAP3K9P80192 1104 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 HDLBPQ00341 1268 aaKnown RBP12.24□□□□□ -0.45
TPM3-210ENST00000368530 VGLL4Q14135 290 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 CHD1LQ86WJ1 897 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 BICC1Q9H694 974 aaKnown RBP12.24□□□□□ -0.45
TPM3-210ENST00000368530 EFCC1Q9HA90 598 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 LRRFIP2Q9Y608 721 aaKnown RBP12.24□□□□□ -0.45
TPM3-210ENST00000368530 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
TPM3-210ENST00000368530 C8orf34Q49A92 452 aa12.23□□□□□ -0.45
TPM3-210ENST00000368530 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
TPM3-210ENST00000368530 MRIQ9BWK5 157 aa12.23□□□□□ -0.45
TPM3-210ENST00000368530 USP44Q9H0E7 712 aa12.23□□□□□ -0.45
TPM3-210ENST00000368530 IQSEC3Q9UPP2 1182 aaPredicted RBP12.23□□□□□ -0.45
TPM3-210ENST00000368530 OTOFQ9HC10 1997 aa12.23□□□□□ -0.45
TPM3-210ENST00000368530 PDE8BO95263 885 aa12.22□□□□□ -0.45
TPM3-210ENST00000368530 EN2P19622 333 aaPredicted RBP12.22□□□□□ -0.45
TPM3-210ENST00000368530 CACNB3P54284 484 aa12.22□□□□□ -0.45
TPM3-210ENST00000368530 APOBEC3HQ6NTF7 200 aaKnown RBP12.22□□□□□ -0.45
TPM3-210ENST00000368530 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
TPM3-210ENST00000368530 CCL15-CCL14A0A0B4J2E2 113 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 SPDYE5A6NIY4 337 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 HMMRO75330 724 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 FGFR2P21802 821 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 BCAMP50895 628 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 GTF2A2P52657 109 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 CCL15Q16663 113 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 ZNF333Q96JL9 665 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 ZDHHC15Q96MV8 337 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 SNCAIPQ9Y6H5 919 aa12.21□□□□□ -0.45
TPM3-210ENST00000368530 SMARCA5O60264 1052 aaPredicted RBP12.21□□□□□ -0.46
TPM3-210ENST00000368530 TNNI2P48788 182 aa12.21□□□□□ -0.46
TPM3-210ENST00000368530 FKBP1CQ5VVH2 108 aa12.21□□□□□ -0.46
TPM3-210ENST00000368530 FAM83AQ86UY5 434 aa12.21□□□□□ -0.46
TPM3-210ENST00000368530 KLHDC4Q8TBB5 520 aa12.21□□□□□ -0.46
TPM3-210ENST00000368530 OTUD5Q96G74 571 aa12.21□□□□□ -0.46
TPM3-210ENST00000368530 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.46
TPM3-210ENST00000368530 ARAP2Q8WZ64 1704 aa12.2□□□□□ -0.46
TPM3-210ENST00000368530 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
TPM3-210ENST00000368530 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
TPM3-210ENST00000368530 CHAF1AQ13111 956 aaPredicted RBP12.2□□□□□ -0.46
TPM3-210ENST00000368530 TAF1CQ15572 869 aaPredicted RBP12.2□□□□□ -0.46
TPM3-210ENST00000368530 HABP4Q5JVS0 413 aaKnown RBP12.2□□□□□ -0.46
TPM3-210ENST00000368530 TBC1D22AQ8WUA7 517 aa12.2□□□□□ -0.46
TPM3-210ENST00000368530 ZKSCAN4Q969J2 545 aaPredicted RBP12.2□□□□□ -0.46
TPM3-210ENST00000368530 TEKT1Q969V4 418 aa12.2□□□□□ -0.46
TPM3-210ENST00000368530 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
TPM3-210ENST00000368530 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
TPM3-210ENST00000368530 KIAA0100Q14667 2235 aaKnown RBP12.2□□□□□ -0.46
TPM3-210ENST00000368530 RBBP6Q7Z6E9 1792 aaKnown RBP12.19□□□□□ -0.46
TPM3-210ENST00000368530 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 IRF6O14896 467 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 TLR2O60603 784 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 ERO1BQ86YB8 467 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 ARHGAP39Q9C0H5 1083 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 CSADQ9Y600 493 aa12.19□□□□□ -0.46
TPM3-210ENST00000368530 HHIPL2Q6UWX4 724 aa12.18□□□□□ -0.46
TPM3-210ENST00000368530 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
TPM3-210ENST00000368530 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
TPM3-210ENST00000368530 EXOC6BQ9Y2D4 811 aa12.18□□□□□ -0.46
TPM3-210ENST00000368530 CETPP11597 493 aa12.17□□□□□ -0.46
TPM3-210ENST00000368530 CTGFP29279 349 aa12.17□□□□□ -0.46
TPM3-210ENST00000368530 ANP32AP39687 249 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms