RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 CCDC191Q8NCU4 936 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 ZNF516Q92618 1163 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 RPGRQ92834 1020 aaKnown RBP3.96□□□□□ -1.78
PTPRC-203ENST00000367367 NLRP3Q96P20 1036 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 CCDC85AQ96PX6 553 aaPredicted RBP3.96□□□□□ -1.78
PTPRC-203ENST00000367367 DNAJC2Q99543 621 aaKnown RBP3.96□□□□□ -1.78
PTPRC-203ENST00000367367 IL21Q9HBE4 155 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 AAASQ9NRG9 546 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 BRPF3Q9ULD4 1205 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 COL4A5P29400 1685 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 RNF123Q5XPI4 1314 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 SMAPO00193 183 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 NFKBIEO00221 500 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 BCAR3O75815 825 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 PRELPP51888 382 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 TRIM28Q13263 835 aaKnown RBP3.96□□□□□ -1.78
PTPRC-203ENST00000367367 PTK7Q13308 1070 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 WASHC4Q2M389 1173 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 LCE2CQ5TA81 110 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 STYK1Q6J9G0 422 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 TMED8Q6PL24 325 aaPredicted RBP3.96□□□□□ -1.78
PTPRC-203ENST00000367367 DPH6Q7L8W6 267 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 CERS3Q8IU89 383 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 ZBTB38Q8NAP3 1195 aaPredicted RBP3.96□□□□□ -1.78
PTPRC-203ENST00000367367 TSC1Q92574 1164 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 CNKSR1Q969H4 720 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 SNED1Q8TER0 1413 aa3.96□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L3A6NCW0 530 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L4A6NCW7 530 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 HOXA2O43364 376 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 PCCAP05165 728 aaPredicted RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 FBXO45P0C2W1 286 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 RARSP54136 660 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 PPP4CP60510 307 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 HDLBPQ00341 1268 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 GCKRQ14397 625 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 ALDH1L2Q3SY69 923 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 SLC10A5Q5PT55 438 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 BEND3Q5T5X7 828 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L2Q6R6M4 530 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L1Q7RTZ2 530 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 LINS1Q8NG48 757 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 CELF1Q92879 486 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 SEC31BQ9NQW1 1179 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 TNNQ9UQP3 1299 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 SCN4AP35499 1836 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 MYO5AQ9Y4I1 1855 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 PTPRCP08575 1304 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 CDHR2Q9BYE9 1310 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 PPEF1O14829 653 aaPredicted RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 CT47B1P0C2W7 299 aaPredicted RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 NBPF7P0C2Y1 421 aaPredicted RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 ALDH1B1P30837 517 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 HOXA10P31260 410 aaPredicted RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 ELOAQ14241 798 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 DDX46Q7L014 1031 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 NKX2-3Q8TAU0 364 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 ZNF526Q8TF50 670 aaPredicted RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 C7orf43Q8WVR3 580 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 FRAT1Q92837 279 aaPredicted RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 RBM17Q96I25 401 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 PURBQ96QR8 312 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 SRCIN1Q9C0H9 1055 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 TAOK3Q9H2K8 898 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 RNF181Q9P0P0 153 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 NOB1Q9ULX3 412 aaKnown RBP3.95□□□□□ -1.78
PTPRC-203ENST00000367367 KIAA1024Q9UPX6 916 aa3.95□□□□□ -1.78
PTPRC-203ENST00000367367 KIF16BQ96L93 1317 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 ZC3H4Q9UPT8 1303 aaKnown RBP3.94□□□□□ -1.78
PTPRC-203ENST00000367367 H7C1W4 665 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 GRM8O00222 908 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 PDE8AO60658 829 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 DKK1O94907 266 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 SLC10A3P09131 477 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 TRIM27P14373 513 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 GGCXP38435 758 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 CASP7P55210 303 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 CTSWP56202 376 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 CLDN10P78369 228 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 SF3B3Q15393 1217 aaKnown RBP3.94□□□□□ -1.78
PTPRC-203ENST00000367367 CCDC93Q567U6 631 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 ZNF784Q8NCA9 323 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-203ENST00000367367 CRAMP1Q96RY5 1269 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 PIF1Q9H611 641 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 GREM2Q9H772 168 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 ZNF277Q9NRM2 450 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-203ENST00000367367 C9orf78Q9NZ63 289 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-203ENST00000367367 WDR90Q96KV7 1748 aa3.94□□□□□ -1.78
PTPRC-203ENST00000367367 ECM29Q5VYK3 1845 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L15C9J2P7 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L10C9JJH3 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L13C9JLJ4 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L12C9JPN9 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L11C9JVI0 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L21D6R901 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L18D6R9N7 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L22D6RA61 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L17D6RBQ6 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L19D6RCP7 530 aa3.93□□□□□ -1.78
PTPRC-203ENST00000367367 USP17L20D6RJB6 530 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms