RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
CTSD-202ENST00000367196 ERO1BQ86YB8 467 aa18.38■□□□□ 0.53
CTSD-202ENST00000367196 SLF2Q8IX21 1173 aa18.38■□□□□ 0.53
CTSD-202ENST00000367196 FAM151AQ8WW52 585 aa18.38■□□□□ 0.53
CTSD-202ENST00000367196 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
CTSD-202ENST00000367196 PDS5AQ29RF7 1337 aaKnown RBP18.38■□□□□ 0.53
CTSD-202ENST00000367196 AK9Q5TCS8 1911 aa18.37■□□□□ 0.53
CTSD-202ENST00000367196 PDE4DIPQ5VU43 2346 aa18.37■□□□□ 0.53
CTSD-202ENST00000367196 PRDX5P30044 214 aa18.37■□□□□ 0.53
CTSD-202ENST00000367196 PHKA1P46020 1223 aa18.37■□□□□ 0.53
CTSD-202ENST00000367196 MVPQ14764 893 aaKnown RBP18.37■□□□□ 0.53
CTSD-202ENST00000367196 CCDC102BQ68D86 513 aa18.37■□□□□ 0.53
CTSD-202ENST00000367196 ZFYVE28Q9HCC9 887 aa18.37■□□□□ 0.53
CTSD-202ENST00000367196 ZCCHC17Q9NP64 241 aaKnown RBP18.37■□□□□ 0.53
CTSD-202ENST00000367196 GNAI2P04899 355 aa18.36■□□□□ 0.53
CTSD-202ENST00000367196 CETPP11597 493 aa18.36■□□□□ 0.53
CTSD-202ENST00000367196 SP3Q02447 781 aa18.36■□□□□ 0.53
CTSD-202ENST00000367196 SNAPC2Q13487 334 aa18.36■□□□□ 0.53
CTSD-202ENST00000367196 TAF1CQ15572 869 aaPredicted RBP18.36■□□□□ 0.53
CTSD-202ENST00000367196 DIXDC1Q155Q3 683 aa18.36■□□□□ 0.53
CTSD-202ENST00000367196 SPTY2D1Q68D10 685 aaPredicted RBP18.36■□□□□ 0.53
CTSD-202ENST00000367196 OTOP1Q7RTM1 612 aa18.36■□□□□ 0.53
CTSD-202ENST00000367196 FRAT1Q92837 279 aaPredicted RBP18.36■□□□□ 0.53
CTSD-202ENST00000367196 PTPN18Q99952 460 aa18.36■□□□□ 0.53
CTSD-202ENST00000367196 MYH2Q9UKX2 1941 aa18.35■□□□□ 0.53
CTSD-202ENST00000367196 TRIM27P14373 513 aa18.35■□□□□ 0.53
CTSD-202ENST00000367196 PPIL2Q13356 520 aa18.35■□□□□ 0.53
CTSD-202ENST00000367196 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
CTSD-202ENST00000367196 DZIP1Q86YF9 867 aaKnown RBP18.35■□□□□ 0.53
CTSD-202ENST00000367196 BRI3BPQ8WY22 251 aa18.35■□□□□ 0.53
CTSD-202ENST00000367196 SNCAIPQ9Y6H5 919 aa18.35■□□□□ 0.53
CTSD-202ENST00000367196 A0A1B0GUL7 405 aa18.34■□□□□ 0.53
CTSD-202ENST00000367196 PPATQ06203 517 aa18.34■□□□□ 0.53
CTSD-202ENST00000367196 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
CTSD-202ENST00000367196 EFCC1Q9HA90 598 aa18.34■□□□□ 0.53
CTSD-202ENST00000367196 USP40Q9NVE5 1235 aa18.34■□□□□ 0.53
CTSD-202ENST00000367196 DOCK2Q92608 1830 aa18.33■□□□□ 0.53
CTSD-202ENST00000367196 ADORA1P30542 326 aa18.33■□□□□ 0.52
CTSD-202ENST00000367196 TCP10Q12799 353 aa18.33■□□□□ 0.52
CTSD-202ENST00000367196 RASGRF1Q13972 1273 aa18.33■□□□□ 0.52
CTSD-202ENST00000367196 CD99L2Q8TCZ2 262 aa18.33■□□□□ 0.52
CTSD-202ENST00000367196 ZKSCAN4Q969J2 545 aaPredicted RBP18.33■□□□□ 0.52
CTSD-202ENST00000367196 ABCF2Q9UG63 623 aa18.33■□□□□ 0.52
CTSD-202ENST00000367196 GAKO14976 1311 aa18.32■□□□□ 0.52
CTSD-202ENST00000367196 IRF6O14896 467 aa18.32■□□□□ 0.52
CTSD-202ENST00000367196 TIMM10P62072 90 aa18.32■□□□□ 0.52
CTSD-202ENST00000367196 TFCP2Q12800 502 aa18.32■□□□□ 0.52
CTSD-202ENST00000367196 GORABQ5T7V8 394 aa18.32■□□□□ 0.52
CTSD-202ENST00000367196 ZKSCAN2Q63HK3 967 aa18.32■□□□□ 0.52
CTSD-202ENST00000367196 MIGA2Q7L4E1 593 aa18.32■□□□□ 0.52
CTSD-202ENST00000367196 XAGE2Q96GT9 111 aa18.32■□□□□ 0.52
CTSD-202ENST00000367196 ENTPD3O75355 529 aa18.31■□□□□ 0.52
CTSD-202ENST00000367196 BCAR3O75815 825 aa18.31■□□□□ 0.52
CTSD-202ENST00000367196 NFIAQ12857 509 aa18.31■□□□□ 0.52
CTSD-202ENST00000367196 G3BP1Q13283 466 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTSD-202ENST00000367196 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
CTSD-202ENST00000367196 NEUROD6Q96NK8 337 aa18.31■□□□□ 0.52
CTSD-202ENST00000367196 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
CTSD-202ENST00000367196 PTPN22Q9Y2R2 807 aa18.31■□□□□ 0.52
CTSD-202ENST00000367196 KIF22Q14807 665 aa18.3■□□□□ 0.52
CTSD-202ENST00000367196 NOL9Q5SY16 702 aaKnown RBP18.3■□□□□ 0.52
CTSD-202ENST00000367196 ERICH6Q7L0X2 663 aa18.3■□□□□ 0.52
CTSD-202ENST00000367196 FTSJ3Q8IY81 847 aaKnown RBP18.3■□□□□ 0.52
CTSD-202ENST00000367196 CLUAP1Q96AJ1 413 aa18.3■□□□□ 0.52
CTSD-202ENST00000367196 FAM198AQ9UFP1 575 aa18.3■□□□□ 0.52
CTSD-202ENST00000367196 ZNF112Q9UJU3 913 aa18.3■□□□□ 0.52
CTSD-202ENST00000367196 MROH7-TTC4A0A0A0MT08 1334 aa18.29■□□□□ 0.52
CTSD-202ENST00000367196 TLR2O60603 784 aa18.29■□□□□ 0.52
CTSD-202ENST00000367196 INPP5BP32019 993 aa18.29■□□□□ 0.52
CTSD-202ENST00000367196 GSTO1P78417 241 aa18.29■□□□□ 0.52
CTSD-202ENST00000367196 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
CTSD-202ENST00000367196 ZSCAN29Q8IWY8 852 aaPredicted RBP18.29■□□□□ 0.52
CTSD-202ENST00000367196 FAM163AQ96GL9 167 aaPredicted RBP18.29■□□□□ 0.52
CTSD-202ENST00000367196 RBBP6Q7Z6E9 1792 aaKnown RBP18.28■□□□□ 0.52
CTSD-202ENST00000367196 BTBD19C9JJ37 291 aa18.28■□□□□ 0.52
CTSD-202ENST00000367196 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
CTSD-202ENST00000367196 GNRH1P01148 92 aa18.28■□□□□ 0.52
CTSD-202ENST00000367196 RGS3P49796 1198 aa18.28■□□□□ 0.52
CTSD-202ENST00000367196 KCNH4Q9UQ05 1017 aa18.28■□□□□ 0.52
CTSD-202ENST00000367196 RFX7Q2KHR2 1363 aa18.28■□□□□ 0.52
CTSD-202ENST00000367196 LDHCP07864 332 aa18.27■□□□□ 0.52
CTSD-202ENST00000367196 UQCRFS1P1P0C7P4 283 aa18.27■□□□□ 0.52
CTSD-202ENST00000367196 BTDP43251 543 aa18.27■□□□□ 0.52
CTSD-202ENST00000367196 ANKRD23Q86SG2 305 aa18.27■□□□□ 0.52
CTSD-202ENST00000367196 NBPF11Q86T75 865 aa18.27■□□□□ 0.52
CTSD-202ENST00000367196 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.27■□□□□ 0.52
CTSD-202ENST00000367196 SPATA5Q8NB90 893 aa18.27■□□□□ 0.52
CTSD-202ENST00000367196 PICK1Q9NRD5 415 aa18.27■□□□□ 0.52
CTSD-202ENST00000367196 PNMA6EA0A0J9YXQ4 647 aa18.26■□□□□ 0.51
CTSD-202ENST00000367196 ARID4AP29374 1257 aaPredicted RBP18.26■□□□□ 0.51
CTSD-202ENST00000367196 OS9Q13438 667 aaPredicted RBP18.26■□□□□ 0.51
CTSD-202ENST00000367196 TMEM57Q8N5G2 664 aa18.26■□□□□ 0.51
CTSD-202ENST00000367196 ARMC5Q96C12 935 aa18.26■□□□□ 0.51
CTSD-202ENST00000367196 HMG20BQ9P0W2 317 aa18.26■□□□□ 0.51
CTSD-202ENST00000367196 LACTBP83111 547 aaPredicted RBP18.25■□□□□ 0.51
CTSD-202ENST00000367196 MECOMQ03112 1051 aa18.25■□□□□ 0.51
CTSD-202ENST00000367196 PRPF38BQ5VTL8 546 aaKnown RBP18.25■□□□□ 0.51
CTSD-202ENST00000367196 SCYL3Q8IZE3 742 aa18.25■□□□□ 0.51
CTSD-202ENST00000367196 GPR108Q9NPR9 543 aa18.25■□□□□ 0.51
CTSD-202ENST00000367196 ATRNL1Q5VV63 1379 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms