RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 SOX18P35713 384 aa11.33□□□□□ -0.6
H3F3A-201ENST00000366813 PRSS36Q5K4E3 855 aa11.33□□□□□ -0.6
H3F3A-201ENST00000366813 IL22RA1Q8N6P7 574 aa11.33□□□□□ -0.6
H3F3A-201ENST00000366813 WFDC12Q8WWY7 111 aa11.33□□□□□ -0.6
H3F3A-201ENST00000366813 CEP350Q5VT06 3117 aa11.32□□□□□ -0.6
H3F3A-201ENST00000366813 BRWD3Q6RI45 1802 aa11.32□□□□□ -0.6
H3F3A-201ENST00000366813 GLI3P10071 1580 aa11.32□□□□□ -0.6
H3F3A-201ENST00000366813 ARHGEF5Q12774 1597 aa11.32□□□□□ -0.6
H3F3A-201ENST00000366813 SSFA2P28290 1259 aa11.32□□□□□ -0.6
H3F3A-201ENST00000366813 IREB2P48200 963 aaKnown RBP11.32□□□□□ -0.6
H3F3A-201ENST00000366813 TTC39BQ5VTQ0 682 aaPredicted RBP11.32□□□□□ -0.6
H3F3A-201ENST00000366813 KRT27Q7Z3Y8 459 aa11.32□□□□□ -0.6
H3F3A-201ENST00000366813 SLC52A1Q9NWF4 448 aa11.32□□□□□ -0.6
H3F3A-201ENST00000366813 STIM2Q9P246 746 aa11.32□□□□□ -0.6
H3F3A-201ENST00000366813 CEP162Q5TB80 1403 aa11.31□□□□□ -0.6
H3F3A-201ENST00000366813 TNFRSF10BO14763 440 aa11.31□□□□□ -0.6
H3F3A-201ENST00000366813 ATP2B4P23634 1241 aa11.31□□□□□ -0.6
H3F3A-201ENST00000366813 ZAP70P43403 619 aa11.31□□□□□ -0.6
H3F3A-201ENST00000366813 UNC5CLQ8IV45 518 aa11.31□□□□□ -0.6
H3F3A-201ENST00000366813 SPACA7Q96KW9 195 aa11.31□□□□□ -0.6
H3F3A-201ENST00000366813 ORAI2Q96SN7 254 aa11.31□□□□□ -0.6
H3F3A-201ENST00000366813 PIK3R4Q99570 1358 aa11.31□□□□□ -0.6
H3F3A-201ENST00000366813 NOS1P29475 1434 aa11.3□□□□□ -0.6
H3F3A-201ENST00000366813 TRIP4Q15650 581 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-201ENST00000366813 FAM26DQ5JW98 314 aa11.3□□□□□ -0.6
H3F3A-201ENST00000366813 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
H3F3A-201ENST00000366813 PHLDB3Q6NSJ2 640 aa11.3□□□□□ -0.6
H3F3A-201ENST00000366813 GPR152Q8TDT2 470 aa11.3□□□□□ -0.6
H3F3A-201ENST00000366813 ABTB2Q8N961 1025 aa11.29□□□□□ -0.6
H3F3A-201ENST00000366813 MYOM2P54296 1465 aa11.28□□□□□ -0.6
H3F3A-201ENST00000366813 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
H3F3A-201ENST00000366813 SCNN1AP37088 669 aa11.28□□□□□ -0.6
H3F3A-201ENST00000366813 HYAL2Q12891 473 aa11.28□□□□□ -0.6
H3F3A-201ENST00000366813 EZH2Q15910 746 aaKnown RBP11.28□□□□□ -0.6
H3F3A-201ENST00000366813 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
H3F3A-201ENST00000366813 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.28□□□□□ -0.6
H3F3A-201ENST00000366813 RRP7BPQ9NSQ0 103 aa11.28□□□□□ -0.6
H3F3A-201ENST00000366813 PPP1R1BQ9UD71 204 aaPredicted RBP11.28□□□□□ -0.6
H3F3A-201ENST00000366813 TRPM2O94759 1503 aa11.27□□□□□ -0.61
H3F3A-201ENST00000366813 EHBP1L1Q8N3D4 1523 aa11.27□□□□□ -0.61
H3F3A-201ENST00000366813 DUOX2Q9NRD8 1548 aa11.27□□□□□ -0.61
H3F3A-201ENST00000366813 KANK1Q14678 1352 aa11.27□□□□□ -0.61
H3F3A-201ENST00000366813 HOXD8P13378 290 aaPredicted RBP11.27□□□□□ -0.61
H3F3A-201ENST00000366813 NOS3P29474 1203 aa11.27□□□□□ -0.61
H3F3A-201ENST00000366813 CACTIN-AS1Q8N1I8 211 aa11.27□□□□□ -0.61
H3F3A-201ENST00000366813 OR13H1Q8NG92 308 aa11.27□□□□□ -0.61
H3F3A-201ENST00000366813 C1orf167Q5SNV9 1468 aa11.26□□□□□ -0.61
H3F3A-201ENST00000366813 DLL1O00548 723 aa11.26□□□□□ -0.61
H3F3A-201ENST00000366813 DCAF11Q8TEB1 546 aa11.26□□□□□ -0.61
H3F3A-201ENST00000366813 SPHKAPQ2M3C7 1700 aa11.25□□□□□ -0.61
H3F3A-201ENST00000366813 ZBTB39O15060 712 aa11.25□□□□□ -0.61
H3F3A-201ENST00000366813 KCNA1Q09470 495 aa11.25□□□□□ -0.61
H3F3A-201ENST00000366813 SSBP4Q9BWG4 385 aaPredicted RBP11.25□□□□□ -0.61
H3F3A-201ENST00000366813 MUC3BQ9H195 1237 aa11.25□□□□□ -0.61
H3F3A-201ENST00000366813 TRIM33Q9UPN9 1127 aa11.25□□□□□ -0.61
H3F3A-201ENST00000366813 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
H3F3A-201ENST00000366813 PPME1Q9Y570 386 aa11.25□□□□□ -0.61
H3F3A-201ENST00000366813 UTRNP46939 3433 aa11.25□□□□□ -0.61
H3F3A-201ENST00000366813 MYO5BQ9ULV0 1848 aa11.25□□□□□ -0.61
H3F3A-201ENST00000366813 ADGRL3Q9HAR2 1447 aa11.24□□□□□ -0.61
H3F3A-201ENST00000366813 KIF15Q9NS87 1388 aa11.24□□□□□ -0.61
H3F3A-201ENST00000366813 MAP4K3Q8IVH8 894 aa11.24□□□□□ -0.61
H3F3A-201ENST00000366813 MRPL18Q9H0U6 180 aaKnown RBP11.24□□□□□ -0.61
H3F3A-201ENST00000366813 AKTIPQ9H8T0 292 aa11.24□□□□□ -0.61
H3F3A-201ENST00000366813 SRA1Q9HD15 236 aaKnown RBP11.24□□□□□ -0.61
H3F3A-201ENST00000366813 COL22A1Q8NFW1 1626 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-201ENST00000366813 SLIT2O94813 1529 aa11.23□□□□□ -0.61
H3F3A-201ENST00000366813 SMNDC1O75940 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
H3F3A-201ENST00000366813 XPCQ01831 940 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-201ENST00000366813 TRIM26Q12899 539 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-201ENST00000366813 CEP135Q66GS9 1140 aa11.23□□□□□ -0.61
H3F3A-201ENST00000366813 ABI2Q9NYB9 513 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-201ENST00000366813 SEPT3Q9UH03 358 aa11.23□□□□□ -0.61
H3F3A-201ENST00000366813 CAMTA1Q9Y6Y1 1673 aa11.23□□□□□ -0.61
H3F3A-201ENST00000366813 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
H3F3A-201ENST00000366813 VPS72Q15906 364 aa11.22□□□□□ -0.61
H3F3A-201ENST00000366813 FOXD4L6Q3SYB3 417 aaPredicted RBP11.22□□□□□ -0.61
H3F3A-201ENST00000366813 FOXD4L3Q6VB84 417 aaPredicted RBP11.22□□□□□ -0.61
H3F3A-201ENST00000366813 TTC16Q8NEE8 873 aa11.22□□□□□ -0.61
H3F3A-201ENST00000366813 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
H3F3A-201ENST00000366813 NINLQ9Y2I6 1382 aa11.22□□□□□ -0.61
H3F3A-201ENST00000366813 LMTK2Q8IWU2 1503 aa11.22□□□□□ -0.61
H3F3A-201ENST00000366813 LAMC1P11047 1609 aa11.21□□□□□ -0.61
H3F3A-201ENST00000366813 ALX3O95076 343 aa11.21□□□□□ -0.61
H3F3A-201ENST00000366813 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.61
H3F3A-201ENST00000366813 NCAPG2Q86XI2 1143 aa11.21□□□□□ -0.61
H3F3A-201ENST00000366813 CAMKK2Q96RR4 588 aa11.21□□□□□ -0.61
H3F3A-201ENST00000366813 LACRTQ9GZZ8 138 aa11.21□□□□□ -0.61
H3F3A-201ENST00000366813 SPON1Q9HCB6 807 aa11.21□□□□□ -0.61
H3F3A-201ENST00000366813 TMEM131LA2VDJ0 1609 aa11.2□□□□□ -0.62
H3F3A-201ENST00000366813 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.2□□□□□ -0.62
H3F3A-201ENST00000366813 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
H3F3A-201ENST00000366813 LINC01387J3KSC0 135 aa11.2□□□□□ -0.62
H3F3A-201ENST00000366813 SETDB1Q15047 1291 aa11.2□□□□□ -0.62
H3F3A-201ENST00000366813 TMEM130Q8N3G9 435 aa11.2□□□□□ -0.62
H3F3A-201ENST00000366813 NUDT16Q96DE0 195 aaKnown RBP11.2□□□□□ -0.62
H3F3A-201ENST00000366813 MEGF10Q96KG7 1140 aa11.2□□□□□ -0.62
H3F3A-201ENST00000366813 ZFP64Q9NPA5 681 aa11.2□□□□□ -0.62
H3F3A-201ENST00000366813 GCC2Q8IWJ2 1684 aa11.2□□□□□ -0.62
H3F3A-201ENST00000366813 MARF1Q9Y4F3 1742 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms