RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 C1orf127Q8N9H9 656 aa11.11□□□□□ -0.63
YBX3-204ENST00000366290 MRRFQ96E11 262 aaKnown RBP11.11□□□□□ -0.63
YBX3-204ENST00000366290 DUSP9Q99956 384 aaKnown RBP11.11□□□□□ -0.63
YBX3-204ENST00000366290 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
YBX3-204ENST00000366290 KIAA1522Q9P206 1035 aaPredicted RBP11.11□□□□□ -0.63
YBX3-204ENST00000366290 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
YBX3-204ENST00000366290 MMP20O60882 483 aa11.1□□□□□ -0.63
YBX3-204ENST00000366290 MX2P20592 715 aa11.1□□□□□ -0.63
YBX3-204ENST00000366290 CTBSQ01459 385 aa11.1□□□□□ -0.63
YBX3-204ENST00000366290 TMEM132EQ6IEE7 984 aa11.1□□□□□ -0.63
YBX3-204ENST00000366290 FBF1Q8TES7 1133 aa11.1□□□□□ -0.63
YBX3-204ENST00000366290 BHMTQ93088 406 aa11.1□□□□□ -0.63
YBX3-204ENST00000366290 ADAMTS8Q9UP79 889 aa11.1□□□□□ -0.63
YBX3-204ENST00000366290 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
YBX3-204ENST00000366290 EREGO14944 169 aa11.09□□□□□ -0.63
YBX3-204ENST00000366290 CELA2BP08218 269 aaPredicted RBP11.09□□□□□ -0.63
YBX3-204ENST00000366290 DCAF11Q8TEB1 546 aa11.09□□□□□ -0.63
YBX3-204ENST00000366290 DDX17Q92841 729 aaKnown RBP11.09□□□□□ -0.63
YBX3-204ENST00000366290 PARP2Q9UGN5 583 aa11.09□□□□□ -0.63
YBX3-204ENST00000366290 KIAA1210Q9ULL0 1709 aa11.09□□□□□ -0.63
YBX3-204ENST00000366290 CYP2E1P05181 493 aaPredicted RBP11.08□□□□□ -0.64
YBX3-204ENST00000366290 XPCQ01831 940 aaPredicted RBP11.08□□□□□ -0.64
YBX3-204ENST00000366290 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
YBX3-204ENST00000366290 OR13H1Q8NG92 308 aa11.08□□□□□ -0.64
YBX3-204ENST00000366290 CCDC74AQ96AQ1 378 aa11.08□□□□□ -0.64
YBX3-204ENST00000366290 BCL11AQ9H165 835 aa11.08□□□□□ -0.64
YBX3-204ENST00000366290 RNF19AQ9NV58 838 aa11.08□□□□□ -0.64
YBX3-204ENST00000366290 PLEKHH1Q9ULM0 1364 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 MAP3K6O95382 1288 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 CES1P23141 567 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 WAPLQ7Z5K2 1190 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 PMEPA1Q969W9 287 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 ACDQ96AP0 544 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 SIN3AQ96ST3 1273 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 TLR7Q9NYK1 1049 aaKnown RBP11.07□□□□□ -0.64
YBX3-204ENST00000366290 STK26Q9P289 416 aa11.07□□□□□ -0.64
YBX3-204ENST00000366290 FMN2Q9NZ56 1722 aa11.06□□□□□ -0.64
YBX3-204ENST00000366290 POLR3DP05423 398 aaPredicted RBP11.06□□□□□ -0.64
YBX3-204ENST00000366290 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
YBX3-204ENST00000366290 KANSL3Q9P2N6 904 aa11.06□□□□□ -0.64
YBX3-204ENST00000366290 PRR12Q9ULL5 1215 aa11.06□□□□□ -0.64
YBX3-204ENST00000366290 ADGRB2O60241 1585 aa11.06□□□□□ -0.64
YBX3-204ENST00000366290 PHF20L1A8MW92 1017 aa11.05□□□□□ -0.64
YBX3-204ENST00000366290 C2CD2LO14523 706 aa11.05□□□□□ -0.64
YBX3-204ENST00000366290 PSAPP07602 524 aa11.05□□□□□ -0.64
YBX3-204ENST00000366290 BMP4P12644 408 aa11.05□□□□□ -0.64
YBX3-204ENST00000366290 RXRBP28702 533 aa11.05□□□□□ -0.64
YBX3-204ENST00000366290 GSK3AP49840 483 aa11.05□□□□□ -0.64
YBX3-204ENST00000366290 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
YBX3-204ENST00000366290 GALNT12Q8IXK2 581 aa11.05□□□□□ -0.64
YBX3-204ENST00000366290 AFF2P51816 1311 aa11.05□□□□□ -0.64
YBX3-204ENST00000366290 SRCAPQ6ZRS2 3230 aa11.04□□□□□ -0.64
YBX3-204ENST00000366290 IRS1P35568 1242 aa11.04□□□□□ -0.64
YBX3-204ENST00000366290 SOX18P35713 384 aa11.04□□□□□ -0.64
YBX3-204ENST00000366290 DAB2P98082 770 aa11.04□□□□□ -0.64
YBX3-204ENST00000366290 PSMD2Q13200 908 aa11.04□□□□□ -0.64
YBX3-204ENST00000366290 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.04□□□□□ -0.64
YBX3-204ENST00000366290 TMC4Q7Z404 712 aa11.04□□□□□ -0.64
YBX3-204ENST00000366290 EPS8L3Q8TE67 593 aaKnown RBP11.04□□□□□ -0.64
YBX3-204ENST00000366290 LRRC59Q96AG4 307 aaKnown RBP11.04□□□□□ -0.64
YBX3-204ENST00000366290 NPHS2Q9NP85 383 aa11.04□□□□□ -0.64
YBX3-204ENST00000366290 PNPLA6Q8IY17 1366 aa11.03□□□□□ -0.64
YBX3-204ENST00000366290 VAMP1P23763 118 aa11.03□□□□□ -0.64
YBX3-204ENST00000366290 GNA15P30679 374 aa11.03□□□□□ -0.64
YBX3-204ENST00000366290 PLAURQ03405 335 aa11.03□□□□□ -0.64
YBX3-204ENST00000366290 PI16Q6UXB8 463 aa11.03□□□□□ -0.64
YBX3-204ENST00000366290 DHX32Q7L7V1 743 aaKnown RBP11.03□□□□□ -0.64
YBX3-204ENST00000366290 ORAI2Q96SN7 254 aa11.03□□□□□ -0.64
YBX3-204ENST00000366290 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
YBX3-204ENST00000366290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.03□□□□□ -0.64
YBX3-204ENST00000366290 CDK12Q9NYV4 1490 aaPredicted RBP11.03□□□□□ -0.64
YBX3-204ENST00000366290 ARHGEF28Q8N1W1 1705 aaKnown RBP11.03□□□□□ -0.64
YBX3-204ENST00000366290 MRPL58Q14197 206 aaKnown RBP11.02□□□□□ -0.65
YBX3-204ENST00000366290 ZNF468Q5VIY5 522 aaPredicted RBP11.02□□□□□ -0.65
YBX3-204ENST00000366290 SYT9Q86SS6 491 aa11.02□□□□□ -0.65
YBX3-204ENST00000366290 PRAM1Q96QH2 718 aa11.02□□□□□ -0.65
YBX3-204ENST00000366290 MRS2Q9HD23 443 aa11.02□□□□□ -0.65
YBX3-204ENST00000366290 NSFL1CQ9UNZ2 370 aaKnown RBP11.02□□□□□ -0.65
YBX3-204ENST00000366290 SPG7Q9UQ90 795 aa11.02□□□□□ -0.65
YBX3-204ENST00000366290 CLSPNQ9HAW4 1339 aa11.02□□□□□ -0.65
YBX3-204ENST00000366290 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 PXDNQ92626 1479 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 BCRP11274 1271 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 HOXD8P13378 290 aaPredicted RBP11.01□□□□□ -0.65
YBX3-204ENST00000366290 MAP2K3P46734 347 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 MAP3K10Q02779 954 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 KCNMA1Q12791 1236 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 FRMD6Q96NE9 622 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 SALL4Q9UJQ4 1053 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
YBX3-204ENST00000366290 RGPD8O14715 1765 aaPredicted RBP11□□□□□ -0.65
YBX3-204ENST00000366290 USP32Q8NFA0 1604 aa11□□□□□ -0.65
YBX3-204ENST00000366290 COL22A1Q8NFW1 1626 aaPredicted RBP11□□□□□ -0.65
YBX3-204ENST00000366290 SORBS3O60504 671 aa11□□□□□ -0.65
YBX3-204ENST00000366290 KIF4AO95239 1232 aa11□□□□□ -0.65
YBX3-204ENST00000366290 EDN3P14138 238 aa11□□□□□ -0.65
YBX3-204ENST00000366290 NRLP54845 237 aa11□□□□□ -0.65
YBX3-204ENST00000366290 PCBP4P57723 403 aaKnown RBP11□□□□□ -0.65
YBX3-204ENST00000366290 HYAL2Q12891 473 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms