RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 DGKZQ13574 1117 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 SMN1Q16637 294 aaKnown RBP1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 AKAP4Q5JQC9 854 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 CCDC102BQ68D86 513 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 ZFPM1Q8IX07 1006 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 BANK1Q8NDB2 785 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 PCMTD1Q96MG8 357 aaPredicted RBP1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 KCNK12Q9HB15 430 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 PIDD1Q9HB75 910 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 RAD18Q9NS91 495 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 FAM105AQ9NUU6 356 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 SMPD4Q9NXE4 827 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 FAM13BQ9NYF5 915 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 KLK14Q9P0G3 267 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 C11orf21Q9P2W6 132 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 GTF2IRD1Q9UHL9 959 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 FNDC3AQ9Y2H6 1198 aaKnown RBP1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 TNFRSF18Q9Y5U5 241 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 IRAK3Q9Y616 596 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 ATAD2Q6PL18 1390 aa1.29□□□□□ -2.2
RNU6-54P-201ENST00000365563 GNAT3A8MTJ3 354 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 KRTAP29-1A8MX34 341 aaPredicted RBP1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 CILPO75339 1184 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 PI3P19957 117 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 ACVRL1P37023 503 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 NCOA4Q13772 614 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 RTP5Q14D33 572 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 CSRP2Q16527 193 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 C11orf91Q3C1V1 193 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 UBXN11Q5T124 520 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 LRCH2Q5VUJ6 765 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 CPZQ66K79 652 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 NPAS4Q8IUM7 802 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 NFATC2IPQ8NCF5 419 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 SCG3Q8WXD2 468 aaKnown RBP1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 MYLIPQ8WY64 445 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 VTI1AQ96AJ9 217 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 SIGLEC10Q96LC7 697 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 NECAB3Q96P71 396 aaPredicted RBP1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 POP1Q99575 1024 aaKnown RBP1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 MCOLN1Q9GZU1 580 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 CARS2Q9HA77 564 aaKnown RBP1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 SOX13Q9UN79 622 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 PLAGL2Q9UPG8 496 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 KCNMB2Q9Y691 235 aa1.28□□□□□ -2.2
RNU6-54P-201ENST00000365563 PALM3A6NDB9 673 aaPredicted RBP1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 UBAP1LF5GYI3 381 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 PDE2AO00408 941 aaPredicted RBP1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 DYNC1LI2O43237 492 aaPredicted RBP1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 C21orf2O43822 256 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 AOC2O75106 756 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 DLGAP3O95886 979 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 CYP11A1P05108 521 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 TGFB2P61812 414 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 GSTM4Q03013 218 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 WASHC4Q2M389 1173 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 ZFYVE27Q5T4F4 411 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 COL13A1Q5TAT6 717 aaPredicted RBP1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 ZNF605Q86T29 641 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 TREML1Q86YW5 311 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 LARGE2Q8N3Y3 721 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 TTC9BQ8N6N2 239 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 CEP120Q8N960 986 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 TSEN2Q8NCE0 465 aaKnown RBP1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 MTMR14Q8NCE2 650 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 DDX54Q8TDD1 881 aaKnown RBP1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 BSNDQ8WZ55 320 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 DACT3Q96B18 629 aaPredicted RBP1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 ALPK1Q96QP1 1244 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 PCED1AQ9H1Q7 454 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 ATXN3LQ9H3M9 355 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 GSX1Q9H4S2 264 aaPredicted RBP1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 LGR6Q9HBX8 967 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 USP40Q9NVE5 1235 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 C19orf73Q9NVV2 129 aa1.27□□□□□ -2.21
RNU6-54P-201ENST00000365563 SYNGAP1Q96PV0 1343 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 WDR33Q9C0J8 1336 aaKnown RBP1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 USP17L5A8MUK1 530 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 IGF2BP3O00425 579 aaKnown RBP eCLIP1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 IGFBP4P22692 258 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 SSPNQ14714 243 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 CRIP3Q6Q6R5 217 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 ADAMTSL4Q6UY14 1074 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 BHLHA9Q7RTU4 235 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 TTC6Q86TZ1 520 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 SPACA3Q8IXA5 215 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 LILRA2Q8N149 483 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 SIX5Q8N196 739 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 C1orf127Q8N9H9 656 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 SYT8Q8NBV8 401 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 PIK3R5Q8WYR1 880 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 MYO19Q96H55 970 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 CORO1BQ9BR76 489 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 DUSP23Q9BVJ7 150 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 C1QTNF3Q9BXJ4 246 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 CWC22Q9HCG8 908 aaKnown RBP1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 GOPCQ9HD26 462 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 ABI2Q9NYB9 513 aaPredicted RBP1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 SLAMF8Q9P0V8 285 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 USP20Q9Y2K6 914 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms