RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 STX8Q9UNK0 236 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 NEO1Q92859 1461 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 ADAMTS2O95450 1211 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 CHGBP05060 677 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 ERCC3P19447 782 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 RESTQ13127 1097 aa15.8■□□□□ 0.12
COL6A1-201ENST00000361866 TOB2Q14106 344 aaPredicted RBP15.8■□□□□ 0.12
COL6A1-201ENST00000361866 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
COL6A1-201ENST00000361866 UTP14CQ5TAP6 766 aaKnown RBP15.8■□□□□ 0.12
COL6A1-201ENST00000361866 FGAP02671 866 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 STAT6P42226 847 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 MNAT1P51948 309 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 FBXO18Q8NFZ0 1043 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 RCOR1Q9UKL0 485 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 UNC13BO14795 1591 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 KRT23Q9C075 422 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 PCDHA5Q9Y5H7 936 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 COBLO75128 1261 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 ATP2C2O75185 946 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 CAVIN4Q5BKX8 364 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 MICALL1Q8N3F8 863 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 EEF2KMTQ96G04 330 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 AIFM3Q96NN9 605 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 SERTAD1Q9UHV2 236 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 CTDSPL2Q05D32 466 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 ESR2Q92731 530 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 RASSF4Q9H2L5 321 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 BMP2KQ9NSY1 1161 aaPredicted RBP15.79■□□□□ 0.12
COL6A1-201ENST00000361866 ADCY9O60503 1353 aa15.79■□□□□ 0.12
COL6A1-201ENST00000361866 MED14O60244 1454 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 MACROD2A1Z1Q3 448 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 MCM3P25205 808 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 PPP2R2CQ9Y2T4 447 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 CHD1O14646 1710 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 ZSCAN26Q16670 478 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 CCDC122Q5T0U0 273 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 SPECC1LQ69YQ0 1117 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 HDXQ7Z353 690 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 PSMB7Q99436 277 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 SLF1Q9BQI6 1058 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 ARMT1Q9H993 441 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 POSTNQ15063 836 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 PLBD2Q8NHP8 589 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 ZCRB1Q8TBF4 217 aaKnown RBP15.78■□□□□ 0.12
COL6A1-201ENST00000361866 HAUS7Q99871 368 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 DSCC1Q9BVC3 393 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 TCP11L1Q9NUJ3 509 aa15.78■□□□□ 0.12
COL6A1-201ENST00000361866 RPAP1Q9BWH6 1393 aaPredicted RBP15.77■□□□□ 0.12
COL6A1-201ENST00000361866 BTBD18B2RXH4 712 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 ARID5AQ03989 594 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 ZNF274Q96GC6 653 aaPredicted RBP15.77■□□□□ 0.12
COL6A1-201ENST00000361866 PUS3Q9BZE2 481 aaKnown RBP15.77■□□□□ 0.12
COL6A1-201ENST00000361866 TAF6LQ9Y6J9 622 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 ZEB2O60315 1214 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 KRT9P35527 623 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 TTLL7Q6ZT98 887 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 MAATS1Q7Z4T9 603 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 CCDC113Q9H0I3 377 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 MMRN2Q9H8L6 949 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 CTNND2Q9UQB3 1225 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 JAG2Q9Y219 1238 aa15.77■□□□□ 0.12
COL6A1-201ENST00000361866 LUC7L2Q9Y383 392 aaKnown RBP15.77■□□□□ 0.12
COL6A1-201ENST00000361866 ATP10DQ9P241 1426 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 IVLP07476 585 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 UQCRFS1P1P0C7P4 283 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 USP8P40818 1118 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 SPAG1Q07617 926 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 DCAF5Q96JK2 942 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 UBA5Q9GZZ9 404 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 EPC1Q9H2F5 836 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 KDRP35968 1356 aa15.77■□□□□ 0.11
COL6A1-201ENST00000361866 CLCN6P51797 869 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 PI16Q6UXB8 463 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CNNM2Q9H8M5 875 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 SLC52A2Q9HAB3 445 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 TAB2Q9NYJ8 693 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CUTAO60888 179 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CYLC1P35663 651 aaPredicted RBP15.76■□□□□ 0.11
COL6A1-201ENST00000361866 KMT5BQ4FZB7 885 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CNGA4Q8IV77 575 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 ZNF710Q8N1W2 664 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CCDC43Q96MW1 224 aaKnown RBP15.76■□□□□ 0.11
COL6A1-201ENST00000361866 V9GY48 417 aaPredicted RBP15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CPSF1Q10570 1443 aaKnown RBP15.76■□□□□ 0.11
COL6A1-201ENST00000361866 ROBO2Q9HCK4 1378 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 RILPL1Q5EBL4 403 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 EPHA10Q5JZY3 1008 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 DDX17Q92841 729 aaKnown RBP15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CDC42BPBQ9Y5S2 1711 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
COL6A1-201ENST00000361866 TMCO5BA8MYB1 307 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 CMA1P23946 247 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 NOP2P46087 812 aaKnown RBP15.76■□□□□ 0.11
COL6A1-201ENST00000361866 GTF2A1P52655 376 aaPredicted RBP15.76■□□□□ 0.11
COL6A1-201ENST00000361866 BLZF1Q9H2G9 400 aa15.76■□□□□ 0.11
COL6A1-201ENST00000361866 GYS2P54840 703 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms