RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TTF2Q9UNY4 1162 aaKnown RBP21.03■□□□□ 0.96
CLIP2-202ENST00000361545 EFCAB6Q5THR3 1501 aa21.03■□□□□ 0.96
CLIP2-202ENST00000361545 TAOK3Q9H2K8 898 aa21.03■□□□□ 0.96
CLIP2-202ENST00000361545 INSRP06213 1382 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 PLEKHG1Q9ULL1 1385 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 GYG1P46976 350 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 SNX14Q9Y5W7 946 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 GOLGA6L7A0A1B0GV03 622 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 FNBP4Q8N3X1 1017 aaPredicted RBP21.02■□□□□ 0.96
CLIP2-202ENST00000361545 HOMER2Q9NSB8 354 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 DTNBO60941 627 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 MYCLP12524 364 aaPredicted RBP21.02■□□□□ 0.96
CLIP2-202ENST00000361545 ACTN2P35609 894 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 TBC1D22AQ8WUA7 517 aa21.02■□□□□ 0.96
CLIP2-202ENST00000361545 TRIM37O94972 964 aa21.02■□□□□ 0.95
CLIP2-202ENST00000361545 ZNF830Q96NB3 372 aaPredicted RBP21.02■□□□□ 0.95
CLIP2-202ENST00000361545 A0A1B0GVL5 298 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 SGSM2O43147 1006 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 CYLC1P35663 651 aaPredicted RBP21.01■□□□□ 0.95
CLIP2-202ENST00000361545 GPR162Q16538 588 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 C2CD5Q86YS7 1000 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 IVNS1ABPQ9Y6Y0 642 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 GOLGA6L9A6NEM1 432 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 HARSP12081 509 aaKnown RBP21.01■□□□□ 0.95
CLIP2-202ENST00000361545 USH1GQ495M9 461 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 ZNF354CQ86Y25 554 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 UIMC1Q96RL1 719 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 USP40Q9NVE5 1235 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 OTUD7BQ6GQQ9 843 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 COMMD10Q9Y6G5 202 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 INTS4Q96HW7 963 aaKnown RBP21.01■□□□□ 0.95
CLIP2-202ENST00000361545 PLXNC1O60486 1568 aa21.01■□□□□ 0.95
CLIP2-202ENST00000361545 CCNT1O60563 726 aaKnown RBP21■□□□□ 0.95
CLIP2-202ENST00000361545 CCT6AP40227 531 aaKnown RBP21■□□□□ 0.95
CLIP2-202ENST00000361545 FAM47AQ5JRC9 791 aa21■□□□□ 0.95
CLIP2-202ENST00000361545 MCM3P25205 808 aa21■□□□□ 0.95
CLIP2-202ENST00000361545 GJC1P36383 396 aa21■□□□□ 0.95
CLIP2-202ENST00000361545 IFI16Q16666 785 aaKnown RBP21■□□□□ 0.95
CLIP2-202ENST00000361545 DOK7Q18PE1 504 aa21■□□□□ 0.95
CLIP2-202ENST00000361545 CERS3Q8IU89 383 aa21■□□□□ 0.95
CLIP2-202ENST00000361545 USP44Q9H0E7 712 aa21■□□□□ 0.95
CLIP2-202ENST00000361545 NSMFQ6X4W1 530 aa21■□□□□ 0.95
CLIP2-202ENST00000361545 KCNQ4P56696 695 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 TFAP4Q01664 338 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 TYRO3Q06418 890 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 FLAD1Q8NFF5 587 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 BICDL2A1A5D9 508 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 CRKLP46109 303 aaKnown RBP20.99■□□□□ 0.95
CLIP2-202ENST00000361545 PSMD1Q99460 953 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 NAP1L4Q99733 375 aaKnown RBP20.99■□□□□ 0.95
CLIP2-202ENST00000361545 MYO5CQ9NQX4 1742 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 CCDC186Q7Z3E2 898 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 ZBTB38Q8NAP3 1195 aaPredicted RBP20.99■□□□□ 0.95
CLIP2-202ENST00000361545 FERMT1Q9BQL6 677 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 RNF216Q9NWF9 866 aaPredicted RBP20.99■□□□□ 0.95
CLIP2-202ENST00000361545 UGGT1Q9NYU2 1555 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 hCG_1642624A0A1W2PR95 340 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 H7C1D1 291 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 TXKP42681 527 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 SV2BQ7L1I2 683 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 CCDC91Q7Z6B0 441 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 GINS2Q9Y248 185 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 CFAP74Q9C0B2 1584 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 RILPL1Q5EBL4 403 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 PHKBQ93100 1093 aa20.99■□□□□ 0.95
CLIP2-202ENST00000361545 AOX1Q06278 1338 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 BCAMP50895 628 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 ARHGEF25Q86VW2 580 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 DDX39AO00148 427 aaKnown RBP20.98■□□□□ 0.95
CLIP2-202ENST00000361545 SKILP12757 684 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 LMAN1P49257 510 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 NOD1Q9Y239 953 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 UBXN1Q04323 297 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 EHBP1Q8NDI1 1231 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 TEKT1Q969V4 418 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 HOOK2Q96ED9 719 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 CARD10Q9BWT7 1032 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 SCNN1DP51172 638 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 KIAA0825Q8IV33 1275 aa20.98■□□□□ 0.95
CLIP2-202ENST00000361545 DIS3L2Q8IYB7 885 aaKnown RBP20.98■□□□□ 0.95
CLIP2-202ENST00000361545 NLRP1Q9C000 1473 aa20.97■□□□□ 0.95
CLIP2-202ENST00000361545 DCAF17Q5H9S7 520 aaPredicted RBP20.97■□□□□ 0.95
CLIP2-202ENST00000361545 TSPOAP1O95153 1857 aa20.97■□□□□ 0.95
CLIP2-202ENST00000361545 IBTKQ9P2D0 1353 aaPredicted RBP20.97■□□□□ 0.95
CLIP2-202ENST00000361545 ZMYM4Q5VZL5 1548 aa20.97■□□□□ 0.95
CLIP2-202ENST00000361545 MAP2K1Q02750 393 aaPredicted RBP20.97■□□□□ 0.95
CLIP2-202ENST00000361545 KIAA0753Q2KHM9 967 aa20.97■□□□□ 0.95
CLIP2-202ENST00000361545 MBD5Q9P267 1494 aa20.97■□□□□ 0.95
CLIP2-202ENST00000361545 KDRP35968 1356 aa20.97■□□□□ 0.95
CLIP2-202ENST00000361545 ROBO2Q9HCK4 1378 aa20.97■□□□□ 0.95
CLIP2-202ENST00000361545 LRRC24Q50LG9 513 aa20.96■□□□□ 0.95
CLIP2-202ENST00000361545 CCDC65Q8IXS2 484 aa20.96■□□□□ 0.95
CLIP2-202ENST00000361545 ZNF335Q9H4Z2 1342 aaPredicted RBP20.96■□□□□ 0.95
CLIP2-202ENST00000361545 CCDC169A6NNP5 214 aa20.96■□□□□ 0.95
CLIP2-202ENST00000361545 CFBP00751 764 aa20.96■□□□□ 0.95
CLIP2-202ENST00000361545 ATP5JP18859 108 aa20.96■□□□□ 0.95
CLIP2-202ENST00000361545 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
CLIP2-202ENST00000361545 ZBED4O75132 1171 aa20.96■□□□□ 0.95
CLIP2-202ENST00000361545 FAM173BQ6P4H8 233 aa20.96■□□□□ 0.95
CLIP2-202ENST00000361545 TMEM110-MUSTN1A8MSY1 372 aa20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms