RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ZCCHC11Q5TAX3 1644 aaKnown RBP15.25■□□□□ 0.03
LDB3-202ENST00000361373 ELP1O95163 1332 aa15.25■□□□□ 0.03
LDB3-202ENST00000361373 LOC102724428A0A0B4J2F2 783 aa15.25■□□□□ 0.03
LDB3-202ENST00000361373 GCOM1H8Y6P7 765 aaPredicted RBP15.25■□□□□ 0.03
LDB3-202ENST00000361373 MYZAPP0CAP1 466 aa15.25■□□□□ 0.03
LDB3-202ENST00000361373 SIK1P57059 783 aa15.25■□□□□ 0.03
LDB3-202ENST00000361373 HAUS3Q68CZ6 603 aa15.25■□□□□ 0.03
LDB3-202ENST00000361373 MACROD2A1Z1Q3 448 aa15.25■□□□□ 0.03
LDB3-202ENST00000361373 TNFAIP1Q13829 316 aa15.25■□□□□ 0.03
LDB3-202ENST00000361373 TMC4Q7Z404 712 aa15.25■□□□□ 0.03
LDB3-202ENST00000361373 ROBO2Q9HCK4 1378 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 CNKSR1Q969H4 720 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 BRDTQ58F21 947 aaPredicted RBP15.24■□□□□ 0.03
LDB3-202ENST00000361373 SNX14Q9Y5W7 946 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 GOLGA6L10A0A0M3HER8 536 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 ZAP70P43403 619 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 CKAP4Q07065 602 aaKnown RBP15.24■□□□□ 0.03
LDB3-202ENST00000361373 IFFO1Q0D2I5 559 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 DLGAP5Q15398 846 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 SV2BQ7L1I2 683 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 TRMT1Q9NXH9 659 aaKnown RBP15.24■□□□□ 0.03
LDB3-202ENST00000361373 PAXBP1Q9Y5B6 917 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 ZNF532Q9HCE3 1301 aa15.24■□□□□ 0.03
LDB3-202ENST00000361373 BACH1O14867 736 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 BEND3Q5T5X7 828 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 KRT25Q7Z3Z0 450 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 LMBR1Q8WVP7 490 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 AATFQ9NY61 560 aaKnown RBP eCLIP15.23■□□□□ 0.03
LDB3-202ENST00000361373 ZNF772Q68DY9 489 aaPredicted RBP15.23■□□□□ 0.03
LDB3-202ENST00000361373 ZKSCAN3Q9BRR0 538 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 KRT83P78385 493 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 MCTP2Q6DN12 878 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 VTI1AQ96AJ9 217 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 SYNMO15061 1565 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 TYRO3Q06418 890 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 CCDC129Q6ZRS4 1044 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 OTUD7AQ8TE49 926 aaPredicted RBP15.23■□□□□ 0.03
LDB3-202ENST00000361373 TEKT1Q969V4 418 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 SYNCQ9H7C4 482 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 SLC1A4P43007 532 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 FAM160A1Q05DH4 1040 aa15.23■□□□□ 0.03
LDB3-202ENST00000361373 AOPEPQ8N6M6 819 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 MSANTD4Q8NCY6 345 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 FAM227BQ96M60 508 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 SSH2Q76I76 1423 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 GNG11P61952 73 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 LETM2Q2VYF4 491 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 GPCPD1Q9NPB8 672 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 GPR108Q9NPR9 543 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 PNMA2Q9UL42 364 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 RNF123Q5XPI4 1314 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 LRRC45Q96CN5 670 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 COPRSQ9NQ92 184 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 TAF3Q5VWG9 929 aa15.22■□□□□ 0.03
LDB3-202ENST00000361373 GIGYF2Q6Y7W6 1299 aaKnown RBP15.22■□□□□ 0.03
LDB3-202ENST00000361373 C16orf45Q96MC5 204 aaPredicted RBP15.22■□□□□ 0.03
LDB3-202ENST00000361373 V9GY48 417 aaPredicted RBP15.22■□□□□ 0.03
LDB3-202ENST00000361373 PPIP5K2O43314 1243 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 RXRAP19793 462 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 AKNAD1Q5T1N1 836 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 DYDC1Q8WWB3 177 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 DNAJC25Q9H1X3 360 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 KDM2BQ8NHM5 1336 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 H7C1D1 291 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 ZBED4O75132 1171 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 RBM10P98175 930 aaKnown RBP15.21■□□□□ 0.03
LDB3-202ENST00000361373 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 JADE2Q9NQC1 790 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 CGNQ9P2M7 1197 aaKnown RBP15.21■□□□□ 0.03
LDB3-202ENST00000361373 SEMA3EO15041 775 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 UBE4AQ14139 1066 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 ANO1Q5XXA6 986 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 SELENOOQ9BVL4 669 aa15.21■□□□□ 0.03
LDB3-202ENST00000361373 THRAP3Q9Y2W1 955 aaKnown RBP15.21■□□□□ 0.03
LDB3-202ENST00000361373 ERBB3P21860 1342 aa15.21■□□□□ 0.02
LDB3-202ENST00000361373 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.02
LDB3-202ENST00000361373 PCP11498 1178 aaKnown RBP15.21■□□□□ 0.02
LDB3-202ENST00000361373 HSPA4P34932 840 aa15.21■□□□□ 0.02
LDB3-202ENST00000361373 PRPF4BQ13523 1007 aaKnown RBP15.21■□□□□ 0.02
LDB3-202ENST00000361373 DNA2P51530 1060 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 TUBB4BP68371 445 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 NONOQ15233 471 aaKnown RBP eCLIP15.2■□□□□ 0.02
LDB3-202ENST00000361373 KIAA0753Q2KHM9 967 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 MMRN2Q9H8L6 949 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 KCNQ3O43525 872 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 TACC1O75410 805 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 CIAO1O76071 339 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 HLTFQ14527 1009 aaKnown RBP eCLIP15.2■□□□□ 0.02
LDB3-202ENST00000361373 TTLL7Q6ZT98 887 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 NEK11Q8NG66 645 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 IVNS1ABPQ9Y6Y0 642 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 ABCC3O15438 1527 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 MFSD14BQ5SR56 506 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 DIS3L2Q8IYB7 885 aaKnown RBP15.2■□□□□ 0.02
LDB3-202ENST00000361373 QTRT2Q9H974 415 aaKnown RBP15.2■□□□□ 0.02
LDB3-202ENST00000361373 CUTAO60888 179 aa15.2■□□□□ 0.02
LDB3-202ENST00000361373 KCNG1Q9UIX4 513 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms