RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 DPF3Q92784 378 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 C11orf49Q9H6J7 331 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 SPTBN5Q9NRC6 3674 aaKnown RBP7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 POU3F3P20264 500 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 CALD1Q05682 793 aaKnown RBP7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 RALBP1Q15311 655 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 DUSP27Q5VZP5 1158 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 METTL16Q86W50 562 aaKnown RBP7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 VGLL2Q8N8G2 317 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 GTF3C2Q8WUA4 911 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 IDI2Q9BXS1 227 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 GBF1Q92538 1859 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 G3V3G9 751 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 TNFRSF10AO00220 468 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 PDHXO00330 501 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 INHAP05111 366 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 KLRK1P26718 216 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 IGHMBP2P38935 993 aaKnown RBP7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 RIPK4P57078 832 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 PRKCZQ05513 592 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 DCAF8Q5TAQ9 597 aa7.74□□□□□ -1.17
CDC42SE2-201ENST00000360515 GCLCP48506 637 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 GTF2IP78347 998 aa7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 APOBEC3HQ6NTF7 200 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 ATXN2LQ8WWM7 1075 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 RUNDC1Q96C34 613 aa7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 FAM163AQ96GL9 167 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 MAPK8IP3Q9UPT6 1336 aa7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 ADCY3O60266 1144 aa7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 GCKRQ14397 625 aa7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 RAET1EQ8TD07 263 aa7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 NBPF3Q9H094 633 aa7.73□□□□□ -1.17
CDC42SE2-201ENST00000360515 CRKP46108 304 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 RASIP1Q5U651 963 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 LBX2Q6XYB7 198 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 CNKSR2Q8WXI2 1034 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 STAP2Q9UGK3 403 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 TAOK2Q9UL54 1235 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 GAKO14976 1311 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 ENTPD3O75355 529 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 ANXA1P04083 346 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 RABL6Q3YEC7 729 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 TJAP1Q5JTD0 557 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 LHX8Q68G74 356 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 KIAA0825Q8IV33 1275 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 ATP5J2-PTCD1G3V325 749 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 RNF208Q9H0X6 261 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 GABRQQ9UN88 632 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 AGTPBP1Q9UPW5 1226 aa7.72□□□□□ -1.17
CDC42SE2-201ENST00000360515 DOCK3Q8IZD9 2030 aa7.71□□□□□ -1.17
CDC42SE2-201ENST00000360515 MROH5Q6ZUA9 1318 aa7.71□□□□□ -1.17
CDC42SE2-201ENST00000360515 MYBBP1AQ9BQG0 1328 aaKnown RBP7.71□□□□□ -1.17
CDC42SE2-201ENST00000360515 HOXC6P09630 235 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 FGFR2P21802 821 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 ITGA6P23229 1130 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 HOXA7P31268 230 aaPredicted RBP7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 CCDC30Q5VVM6 783 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 MYD88Q99836 296 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 SEMA6BQ9H3T3 888 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 EIF2S2P20042 333 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 GNAI1P63096 354 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 NKX3-2P78367 333 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 MKRN3Q13064 507 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 MORN1Q5T089 497 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 LINS1Q8NG48 757 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 FBXO3Q9UK99 471 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 PCDHAC2Q9Y5I4 1007 aa7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 GREB1LQ9C091 1923 aaPredicted RBP7.71□□□□□ -1.18
CDC42SE2-201ENST00000360515 RIC3Q7Z5B4 369 aa7.7□□□□□ -1.18
CDC42SE2-201ENST00000360515 SOCS4Q8WXH5 440 aa7.7□□□□□ -1.18
CDC42SE2-201ENST00000360515 FAM84BQ96KN1 310 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE2-201ENST00000360515 PLXNA1Q9UIW2 1896 aa7.7□□□□□ -1.18
CDC42SE2-201ENST00000360515 SCYL3Q8IZE3 742 aa7.7□□□□□ -1.18
CDC42SE2-201ENST00000360515 KIAA0100Q14667 2235 aaKnown RBP7.7□□□□□ -1.18
CDC42SE2-201ENST00000360515 NRBP1Q9UHY1 535 aa7.7□□□□□ -1.18
CDC42SE2-201ENST00000360515 COL4A4P53420 1690 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 SEMA3EO15041 775 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 COL9A1P20849 921 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 AIMP1Q12904 312 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 PAWRQ96IZ0 340 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 OSBPL5Q9H0X9 879 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 PHAXQ9H814 394 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 TANC1Q9C0D5 1861 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 CTNND1O60716 968 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 FLT3LGP49771 235 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 CDX2Q99626 313 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 WDR18Q9BV38 432 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 TMEM39BQ9GZU3 492 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 MYH16Q9H6N6 1097 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 ANKRD18BA2A2Z9 1011 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 PNMA3Q9UL41 463 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 FZD1Q9UP38 647 aa7.69□□□□□ -1.18
CDC42SE2-201ENST00000360515 MSCO60682 206 aa7.68□□□□□ -1.18
CDC42SE2-201ENST00000360515 PTPRAP18433 802 aa7.68□□□□□ -1.18
CDC42SE2-201ENST00000360515 CDAN1Q8IWY9 1227 aa7.68□□□□□ -1.18
CDC42SE2-201ENST00000360515 MAP3K2Q9Y2U5 619 aa7.68□□□□□ -1.18
CDC42SE2-201ENST00000360515 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
CDC42SE2-201ENST00000360515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.68□□□□□ -1.18
CDC42SE2-201ENST00000360515 MAFAQ8NHW3 353 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms