RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ZNF397Q8NF99 534 aaPredicted RBP11.33□□□□□ -0.6
SIN3A-201ENST00000360439 UBAC1Q9BSL1 405 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
SIN3A-201ENST00000360439 GOLGA6L10A0A0M3HER8 536 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 TMTC2Q8N394 836 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 KIF2CQ99661 725 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 ANO10Q9NW15 660 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 CBFA2T2O43439 604 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-201ENST00000360439 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 CRACR2AQ9BSW2 395 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 DIP2AQ14689 1571 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 SERPINB2P05120 415 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 CCDC175P0C221 793 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 EIF6P56537 245 aaKnown RBP11.32□□□□□ -0.6
SIN3A-201ENST00000360439 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 JMYQ8N9B5 988 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 ZNF594Q96JF6 807 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-201ENST00000360439 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.32□□□□□ -0.62e-6■■■□□ 17.2
SIN3A-201ENST00000360439 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
SIN3A-201ENST00000360439 MMP10P09238 476 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 AK2P54819 239 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 TTF1Q15361 905 aaPredicted RBP11.32□□□□□ -0.6
SIN3A-201ENST00000360439 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 ZNF287Q9HBT7 754 aa11.32□□□□□ -0.6
SIN3A-201ENST00000360439 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
SIN3A-201ENST00000360439 SDF4Q9BRK5 362 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
SIN3A-201ENST00000360439 SMTNL1A8MU46 457 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 SGSM2O43147 1006 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 GSDMDP57764 484 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 SLC20A2Q08357 652 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 STX1AQ16623 288 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 RNF187Q5TA31 235 aaPredicted RBP11.31□□□□□ -0.6
SIN3A-201ENST00000360439 WDR78Q5VTH9 848 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 GPT2Q8TD30 523 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 TM6SF1Q9BZW5 370 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 ATG3Q9NT62 314 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 SPATA31A5Q5VU36 1347 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 SPATA31A7Q8IWB4 1347 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 OVOS2A0A0G2JMS6 1433 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 OVOS2A0A0J9YW53 1432 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 OVOS2Q6IE36 1432 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 TAF5LO75529 589 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 GCKRQ14397 625 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
SIN3A-201ENST00000360439 KLHDC4Q8TBB5 520 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 MST1RQ04912 1400 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 RUFY3Q7L099 469 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 TRIML1Q8N9V2 468 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.31□□□□□ -0.63e-7■■■■■ 27.8
SIN3A-201ENST00000360439 TMEM63CQ9P1W3 806 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 KIF13AQ9H1H9 1805 aa11.31□□□□□ -0.6
SIN3A-201ENST00000360439 TUBB4AP04350 444 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 PICALMQ13492 652 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 ZKSCAN8Q15776 578 aaPredicted RBP11.3□□□□□ -0.6
SIN3A-201ENST00000360439 DEFB132Q7Z7B7 95 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
SIN3A-201ENST00000360439 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 N4BP2L2Q92802 583 aaPredicted RBP11.3□□□□□ -0.6
SIN3A-201ENST00000360439 JPH2Q9BR39 696 aaPredicted RBP11.3□□□□□ -0.6
SIN3A-201ENST00000360439 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 RPS8P62241 208 aaKnown RBP11.3□□□□□ -0.6
SIN3A-201ENST00000360439 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
SIN3A-201ENST00000360439 PROSER3Q2NL68 480 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 ZNF444Q8N0Y2 327 aaPredicted RBP11.3□□□□□ -0.6
SIN3A-201ENST00000360439 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 MAP3K15Q6ZN16 1313 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 CCDC69A6NI79 296 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 RANBP6O60518 1105 aaKnown RBP11.3□□□□□ -0.6
SIN3A-201ENST00000360439 CYP7A1P22680 504 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 ABCD1P33897 745 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 ATL3Q6DD88 541 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 ZNF408Q9H9D4 720 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 SNX14Q9Y5W7 946 aa11.3□□□□□ -0.6
SIN3A-201ENST00000360439 TFCP2Q12800 502 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 STK38Q15208 465 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 TMEM87AQ8NBN3 555 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 CPS1P31327 1500 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 TMEM131LA2VDJ0 1609 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 DCCP43146 1447 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 KIF3CO14782 793 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 PAX3P23760 479 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 GSTO1P78417 241 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 SSH3Q8TE77 659 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 EIF3JO75822 258 aaKnown RBP11.29□□□□□ -0.6
SIN3A-201ENST00000360439 HLA-DOAP06340 250 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
SIN3A-201ENST00000360439 XBP1P17861 261 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 NAA16Q6N069 864 aaPredicted RBP11.29□□□□□ -0.6
SIN3A-201ENST00000360439 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 CCDC43Q96MW1 224 aaKnown RBP11.29□□□□□ -0.6
SIN3A-201ENST00000360439 SCLT1Q96NL6 688 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 SWAP70Q9UH65 585 aa11.29□□□□□ -0.6
SIN3A-201ENST00000360439 ANKRD65E5RJM6 399 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms