RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
VPS13A-203ENST00000360280 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS13A-203ENST00000360280 MAP3K7CLP57077 242 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
VPS13A-203ENST00000360280 WDR44Q5JSH3 913 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 CUL7Q14999 1698 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 CFAP221Q4G0U5 840 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 MUM1L1Q5H9M0 696 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 CFAP70Q5T0N1 1121 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 TRMT112Q9UI30 125 aaKnown RBP10.37□□□□□ -0.75
VPS13A-203ENST00000360280 AFG3L2Q9Y4W6 797 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 CADPSQ9ULU8 1353 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 UQCRFS1P1P0C7P4 283 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 PHEXP78562 749 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 DTHD1Q6ZMT9 781 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 CCDC8Q9H0W5 538 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-203ENST00000360280 EPB41P11171 864 aaKnown RBP10.36□□□□□ -0.75
VPS13A-203ENST00000360280 KRT15P19012 456 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 PHBP35232 272 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 ARHGAP4P98171 946 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-203ENST00000360280 ORC6Q9Y5N6 252 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 RRS1Q15050 365 aaKnown RBP10.36□□□□□ -0.75
VPS13A-203ENST00000360280 RPAINQ86UA6 219 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 SYNRGQ9UMZ2 1314 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 RAPGEF1Q13905 1077 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 PDZD8Q8NEN9 1154 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 WDR70Q9NW82 654 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 CABP1Q9NZU7 370 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 GNA11P29992 359 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 STAG1Q8WVM7 1258 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 P3H4Q92791 437 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 DDX21Q9NR30 783 aaKnown RBP eCLIP10.36□□□□□ -0.75
VPS13A-203ENST00000360280 KRT79Q5XKE5 535 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 CNNM4Q6P4Q7 775 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 DCAF17Q5H9S7 520 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-203ENST00000360280 KRT5P13647 590 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 RBSNQ9H1K0 784 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 HOMER3Q9NSC5 361 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 PPP1R9AQ9ULJ8 1098 aa10.36□□□□□ -0.75
VPS13A-203ENST00000360280 PDCD7Q8N8D1 485 aaKnown RBP10.35□□□□□ -0.75
VPS13A-203ENST00000360280 ASIC3Q9UHC3 531 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 LRRD1A4D1F6 860 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 MX2P20592 715 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 KLHL14Q9P2G3 628 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 SLC12A5Q9H2X9 1139 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 IQUBQ8NA54 791 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 CCDC124Q96CT7 223 aaKnown RBP10.35□□□□□ -0.75
VPS13A-203ENST00000360280 ZKSCAN3Q9BRR0 538 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 BAIAP2L1Q9UHR4 511 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 THEMISQ8N1K5 641 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-203ENST00000360280 RRP36Q96EU6 259 aaKnown RBP10.35□□□□□ -0.75
VPS13A-203ENST00000360280 NUP58Q9BVL2 599 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 EVI5O60447 810 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 CCT6AP40227 531 aaKnown RBP10.35□□□□□ -0.75
VPS13A-203ENST00000360280 PRIM1P49642 420 aaKnown RBP10.35□□□□□ -0.75
VPS13A-203ENST00000360280 GABPAQ06546 454 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 DAPK3O43293 454 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 STK38LQ9Y2H1 464 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 MARCKSP29966 332 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-203ENST00000360280 SMTNP53814 917 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 BANK1Q8NDB2 785 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 TRIM27P14373 513 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 EPS15L1Q9UBC2 864 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 DNM1Q05193 864 aaKnown RBP10.35□□□□□ -0.75
VPS13A-203ENST00000360280 IQCDQ96DY2 449 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 BAG5Q9UL15 447 aa10.35□□□□□ -0.75
VPS13A-203ENST00000360280 MAIP1Q8WWC4 291 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 HAND2P61296 217 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 DIXDC1Q155Q3 683 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 TBC1D8O95759 1140 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 ATP6V1E1P36543 226 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 DHX58Q96C10 678 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 MRPL46Q9H2W6 279 aaKnown RBP10.34□□□□□ -0.75
VPS13A-203ENST00000360280 RPS6KA2Q15349 733 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 TTC21BQ7Z4L5 1316 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 GNAT2P19087 354 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 ARHGAP42A6NI28 874 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 STX2P32856 288 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 CCDC93Q567U6 631 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 MYRIPQ8NFW9 859 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 SIRT1Q96EB6 747 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 NOC4LQ9BVI4 516 aaKnown RBP10.34□□□□□ -0.75
VPS13A-203ENST00000360280 SNX21Q969T3 373 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 KIF11P52732 1056 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 SLC12A2P55011 1212 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 NRBF2Q96F24 287 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 LARP6Q9BRS8 491 aaKnown RBP10.34□□□□□ -0.75
VPS13A-203ENST00000360280 PPP2R5EQ16537 467 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 NUCB1Q02818 461 aa10.34□□□□□ -0.75
VPS13A-203ENST00000360280 SECISBP2LQ93073 1101 aaKnown RBP10.34□□□□□ -0.75
VPS13A-203ENST00000360280 PALM3A6NDB9 673 aaPredicted RBP10.33□□□□□ -0.76
VPS13A-203ENST00000360280 SYF2O95926 243 aaKnown RBP10.33□□□□□ -0.76
VPS13A-203ENST00000360280 NSMCE1Q8WV22 266 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 CALUO43852 315 aaPredicted RBP10.33□□□□□ -0.76
VPS13A-203ENST00000360280 PLCB4Q15147 1175 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 MORC4Q8TE76 937 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 RNF8O76064 485 aa10.33□□□□□ -0.76
VPS13A-203ENST00000360280 NOC2LQ9Y3T9 749 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms