RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 PRKAB2O43741 272 aa29.67■■■□□ 2.34
SHARPIN-201ENST00000359551 IFNL3Q8IZI9 196 aa29.67■■■□□ 2.34
SHARPIN-201ENST00000359551 MYO3BQ8WXR4 1341 aa29.67■■■□□ 2.34
SHARPIN-201ENST00000359551 BAG3O95817 575 aa29.66■■■□□ 2.34
SHARPIN-201ENST00000359551 VIL1P09327 827 aaKnown RBP29.66■■■□□ 2.34
SHARPIN-201ENST00000359551 PRELPP51888 382 aa29.66■■■□□ 2.34
SHARPIN-201ENST00000359551 JDP2Q8WYK2 163 aa29.66■■■□□ 2.34
SHARPIN-201ENST00000359551 HDLBPQ00341 1268 aaKnown RBP29.66■■■□□ 2.34
SHARPIN-201ENST00000359551 HHIPL2Q6UWX4 724 aa29.66■■■□□ 2.34
SHARPIN-201ENST00000359551 IL27Q8NEV9 243 aa29.66■■■□□ 2.34
SHARPIN-201ENST00000359551 TM6SF1Q9BZW5 370 aa29.66■■■□□ 2.34
SHARPIN-201ENST00000359551 APPP05067 770 aa29.65■■■□□ 2.34
SHARPIN-201ENST00000359551 NOL10Q9BSC4 688 aaKnown RBP29.65■■■□□ 2.34
SHARPIN-201ENST00000359551 CRNKL1Q9BZJ0 848 aaKnown RBP29.65■■■□□ 2.34
SHARPIN-201ENST00000359551 NACAP1Q9BZK3 213 aa29.65■■■□□ 2.34
SHARPIN-201ENST00000359551 DAGLAQ9Y4D2 1042 aa29.65■■■□□ 2.34
SHARPIN-201ENST00000359551 TAF6LQ9Y6J9 622 aa29.65■■■□□ 2.34
SHARPIN-201ENST00000359551 ECM29Q5VYK3 1845 aa29.65■■■□□ 2.34
SHARPIN-201ENST00000359551 GIMAP6Q6P9H5 292 aa29.64■■■□□ 2.34
SHARPIN-201ENST00000359551 RSBN1LQ6PCB5 846 aaPredicted RBP29.64■■■□□ 2.34
SHARPIN-201ENST00000359551 F8W031 263 aaPredicted RBP29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 PSMD14O00487 310 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 BTDP43251 543 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 KRT32Q14532 448 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 IMMTQ16891 758 aaKnown RBP29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 LAMB1P07942 1786 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 TIAM2Q8IVF5 1701 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 RAD17O75943 681 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 ADCK5Q3MIX3 580 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 SDR42E1Q8WUS8 393 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 SNX21Q969T3 373 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 GMLQ99445 158 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 NAPBQ9H115 298 aa29.63■■■□□ 2.33
SHARPIN-201ENST00000359551 NAV1Q8NEY1 1877 aa29.62■■■□□ 2.33
SHARPIN-201ENST00000359551 PLCG2P16885 1265 aa29.62■■■□□ 2.33
SHARPIN-201ENST00000359551 CXCL9Q07325 125 aa29.62■■■□□ 2.33
SHARPIN-201ENST00000359551 KIAA0825Q8IV33 1275 aa29.62■■■□□ 2.33
SHARPIN-201ENST00000359551 TEKT1Q969V4 418 aa29.62■■■□□ 2.33
SHARPIN-201ENST00000359551 ATP8A2Q9NTI2 1148 aa29.61■■■□□ 2.33
SHARPIN-201ENST00000359551 DDX60LQ5H9U9 1706 aaKnown RBP29.61■■■□□ 2.33
SHARPIN-201ENST00000359551 RHBDL3P58872 404 aa29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 ARHGAP27Q6ZUM4 889 aa29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 SH3RF3Q8TEJ3 882 aaPredicted RBP29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 IPO9Q96P70 1041 aaKnown RBP29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 ZSWIM6Q9HCJ5 1215 aa29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 CRKP46108 304 aa29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 SCNN1DP51172 638 aa29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 ZDHHC15Q96MV8 337 aa29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 JAKMIP1Q96N16 626 aaKnown RBP29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 SERPINA10Q9UK55 444 aa29.6■■■□□ 2.33
SHARPIN-201ENST00000359551 FZD9O00144 591 aa29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 ZNF213O14771 459 aa29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 YBX3P16989 372 aaKnown RBP eCLIP29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 PSMA5P28066 241 aa29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 TDO2P48775 406 aa29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 CIAPIN1Q6FI81 312 aa29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 STOX1Q6ZVD7 989 aa29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 AGBL3Q8NEM8 1001 aa29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 MKRN1Q9UHC7 482 aaKnown RBP29.59■■■□□ 2.33
SHARPIN-201ENST00000359551 DCP1AQ9NPI6 582 aaPredicted RBP29.58■■■□□ 2.33
SHARPIN-201ENST00000359551 NEK4P51957 841 aa29.57■■■□□ 2.32
SHARPIN-201ENST00000359551 UPF3BQ9BZI7 483 aaKnown RBP29.57■■■□□ 2.32
SHARPIN-201ENST00000359551 NBPF3Q9H094 633 aa29.57■■■□□ 2.32
SHARPIN-201ENST00000359551 E7EWF7 191 aa29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 LMNB1P20700 586 aa29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 CASTP20810 708 aaKnown RBP29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 HAND2P61296 217 aa29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 TNIP1Q15025 636 aa29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 APOBEC3HQ6NTF7 200 aaKnown RBP29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 TBC1D2Q9BYX2 928 aa29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 MYH1P12882 1939 aa29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 ST18O60284 1047 aa29.56■■■□□ 2.32
SHARPIN-201ENST00000359551 CD2BP2O95400 341 aaKnown RBP29.55■■■□□ 2.32
SHARPIN-201ENST00000359551 BECN1Q14457 450 aa29.55■■■□□ 2.32
SHARPIN-201ENST00000359551 RUFY3Q7L099 469 aa29.55■■■□□ 2.32
SHARPIN-201ENST00000359551 TTC14Q96N46 770 aa29.55■■■□□ 2.32
SHARPIN-201ENST00000359551 NEK1Q96PY6 1258 aa29.55■■■□□ 2.32
SHARPIN-201ENST00000359551 ANAPC4Q9UJX5 808 aa29.55■■■□□ 2.32
SHARPIN-201ENST00000359551 TEX11Q8IYF3 940 aa29.54■■■□□ 2.32
SHARPIN-201ENST00000359551 CYP46A1Q9Y6A2 500 aa29.54■■■□□ 2.32
SHARPIN-201ENST00000359551 SBK1Q52WX2 424 aa29.53■■■□□ 2.32
SHARPIN-201ENST00000359551 BLOC1S2Q6QNY1 142 aa29.53■■■□□ 2.32
SHARPIN-201ENST00000359551 ZBTB12Q9Y330 459 aaPredicted RBP29.53■■■□□ 2.32
SHARPIN-201ENST00000359551 USP5P45974 858 aa29.53■■■□□ 2.32
SHARPIN-201ENST00000359551 CTR9Q6PD62 1173 aa29.53■■■□□ 2.32
SHARPIN-201ENST00000359551 TBC1D10CQ8IV04 446 aa29.53■■■□□ 2.32
SHARPIN-201ENST00000359551 ARPP21Q9UBL0 812 aaPredicted RBP29.53■■■□□ 2.32
SHARPIN-201ENST00000359551 HMGB1P09429 215 aaKnown RBP29.52■■■□□ 2.32
SHARPIN-201ENST00000359551 MMP14P50281 582 aa29.52■■■□□ 2.32
SHARPIN-201ENST00000359551 EIF6P56537 245 aaKnown RBP29.52■■■□□ 2.32
SHARPIN-201ENST00000359551 PPARAQ07869 468 aa29.52■■■□□ 2.32
SHARPIN-201ENST00000359551 COL9A3Q14050 684 aaPredicted RBP29.52■■■□□ 2.32
SHARPIN-201ENST00000359551 TGFBRAP1Q8WUH2 860 aa29.52■■■□□ 2.32
SHARPIN-201ENST00000359551 HDAC9Q9UKV0 1011 aa29.52■■■□□ 2.32
SHARPIN-201ENST00000359551 CPA1P15085 419 aa29.51■■■□□ 2.31
SHARPIN-201ENST00000359551 RPS6KB1P23443 525 aa29.51■■■□□ 2.31
SHARPIN-201ENST00000359551 RPS12P25398 132 aaKnown RBP29.51■■■□□ 2.31
SHARPIN-201ENST00000359551 CDC42EP5Q6NZY7 148 aa29.51■■■□□ 2.31
SHARPIN-201ENST00000359551 HSCBQ8IWL3 235 aa29.51■■■□□ 2.31
SHARPIN-201ENST00000359551 USP17L12C9JPN9 530 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms