RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 PTPDC1A2A3K4 754 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 MAP2K7O14733 419 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 TTC31Q49AM3 519 aaPredicted RBP17.16■□□□□ 0.34
UBAP1-202ENST00000359544 ZNF589Q86UQ0 364 aaPredicted RBP17.16■□□□□ 0.34
UBAP1-202ENST00000359544 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
UBAP1-202ENST00000359544 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 PPP2R2CQ9Y2T4 447 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 U3KPZ7 1027 aaPredicted RBP17.16■□□□□ 0.34
UBAP1-202ENST00000359544 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 MYO1BO43795 1136 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
UBAP1-202ENST00000359544 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
UBAP1-202ENST00000359544 HOXB7P09629 217 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 NDUFA8P51970 172 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 EPC1Q9H2F5 836 aa17.16■□□□□ 0.34
UBAP1-202ENST00000359544 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
UBAP1-202ENST00000359544 A0A1B0GVL5 298 aa17.15■□□□□ 0.34
UBAP1-202ENST00000359544 POTEB2H3BUK9 544 aa17.15■□□□□ 0.34
UBAP1-202ENST00000359544 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
UBAP1-202ENST00000359544 UBASH3AP57075 661 aa17.15■□□□□ 0.34
UBAP1-202ENST00000359544 GNG11P61952 73 aa17.15■□□□□ 0.34
UBAP1-202ENST00000359544 TEX2Q8IWB9 1127 aa17.15■□□□□ 0.34
UBAP1-202ENST00000359544 KCNG4Q8TDN1 519 aa17.15■□□□□ 0.34
UBAP1-202ENST00000359544 H3BQF6 201 aa17.15■□□□□ 0.34
UBAP1-202ENST00000359544 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
UBAP1-202ENST00000359544 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
UBAP1-202ENST00000359544 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
UBAP1-202ENST00000359544 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
UBAP1-202ENST00000359544 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
UBAP1-202ENST00000359544 SERPINC1P01008 464 aa17.14■□□□□ 0.33
UBAP1-202ENST00000359544 TOP1P11387 765 aaKnown RBP17.14■□□□□ 0.33
UBAP1-202ENST00000359544 FOSBP53539 338 aa17.14■□□□□ 0.33
UBAP1-202ENST00000359544 GYS2P54840 703 aa17.14■□□□□ 0.33
UBAP1-202ENST00000359544 G3BP1Q13283 466 aaKnown RBP eCLIP17.14■□□□□ 0.33
UBAP1-202ENST00000359544 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
UBAP1-202ENST00000359544 MKRN1Q9UHC7 482 aaKnown RBP17.14■□□□□ 0.33
UBAP1-202ENST00000359544 NUP188Q5SRE5 1749 aa17.14■□□□□ 0.33
UBAP1-202ENST00000359544 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
UBAP1-202ENST00000359544 HDXQ7Z353 690 aa17.14■□□□□ 0.33
UBAP1-202ENST00000359544 VSTM4Q8IW00 320 aa17.14■□□□□ 0.33
UBAP1-202ENST00000359544 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
UBAP1-202ENST00000359544 C9orf78Q9NZ63 289 aaPredicted RBP17.14■□□□□ 0.33
UBAP1-202ENST00000359544 APOBRQ0VD83 1088 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 STK38Q15208 465 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 ZFP91Q96JP5 570 aaPredicted RBP17.13■□□□□ 0.33
UBAP1-202ENST00000359544 VPS18Q9P253 973 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 RREB1Q92766 1687 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 YEATS4O95619 227 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 EIF2S2P20042 333 aaKnown RBP17.13■□□□□ 0.33
UBAP1-202ENST00000359544 TUBB4BP68371 445 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 CFAP100Q494V2 611 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 FAM177A1Q8N128 213 aaPredicted RBP17.13■□□□□ 0.33
UBAP1-202ENST00000359544 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 CCDC8Q9H0W5 538 aaPredicted RBP17.13■□□□□ 0.33
UBAP1-202ENST00000359544 SIL1Q9H173 461 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 JRKLQ9Y4A0 524 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 RFX7Q2KHR2 1363 aa17.13■□□□□ 0.33
UBAP1-202ENST00000359544 NEDD4P46934 1319 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 ERLIN1O75477 346 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 GUCY2CP25092 1073 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 LINC00301Q8NCQ3 95 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 PPM1EQ8WY54 764 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 CHPF2Q9P2E5 772 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 BIN1O00499 593 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 MYL5Q02045 173 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 PAXIP1Q6ZW49 1069 aaPredicted RBP17.12■□□□□ 0.33
UBAP1-202ENST00000359544 WDR24Q96S15 920 aa17.12■□□□□ 0.33
UBAP1-202ENST00000359544 SASH1O94885 1247 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 NBPF14Q5TI25 921 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 STX10O60499 249 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 ZNF202O95125 648 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 ITPK1Q13572 414 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 DHX32Q7L7V1 743 aaKnown RBP17.11■□□□□ 0.33
UBAP1-202ENST00000359544 TMEM139Q8IV31 216 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 BAG1Q99933 345 aaPredicted RBP17.11■□□□□ 0.33
UBAP1-202ENST00000359544 POLR3EQ9NVU0 708 aa17.11■□□□□ 0.33
UBAP1-202ENST00000359544 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
UBAP1-202ENST00000359544 USP5P45974 858 aa17.1■□□□□ 0.33
UBAP1-202ENST00000359544 SIK1P57059 783 aa17.1■□□□□ 0.33
UBAP1-202ENST00000359544 AMIGO3Q86WK7 504 aa17.1■□□□□ 0.33
UBAP1-202ENST00000359544 MYCBPQ99417 103 aaPredicted RBP17.1■□□□□ 0.33
UBAP1-202ENST00000359544 PDE11AQ9HCR9 933 aa17.1■□□□□ 0.33
UBAP1-202ENST00000359544 KCNQ3O43525 872 aa17.1■□□□□ 0.33
UBAP1-202ENST00000359544 ATP6V1AP38606 617 aa17.1■□□□□ 0.33
UBAP1-202ENST00000359544 HSD3B7Q9H2F3 369 aa17.1■□□□□ 0.33
UBAP1-202ENST00000359544 EIF3CLB5ME19 914 aaKnown RBP17.09■□□□□ 0.33
UBAP1-202ENST00000359544 SPTLC2O15270 562 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 CYP21A2P08686 494 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 CHRM1P11229 460 aaPredicted RBP17.09■□□□□ 0.33
UBAP1-202ENST00000359544 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms