RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 NR1I2O75469 434 aa15.51■□□□□ 0.07
VCP-201ENST00000358901 MNAT1P51948 309 aa15.51■□□□□ 0.07
VCP-201ENST00000358901 UBE4AQ14139 1066 aa15.51■□□□□ 0.07
VCP-201ENST00000358901 SEC62Q99442 399 aaKnown RBP15.51■□□□□ 0.07
VCP-201ENST00000358901 BICDL2A1A5D9 508 aa15.51■□□□□ 0.07
VCP-201ENST00000358901 ZNF500O60304 480 aaPredicted RBP15.51■□□□□ 0.07
VCP-201ENST00000358901 DNAJC21Q5F1R6 531 aaKnown RBP15.51■□□□□ 0.07
VCP-201ENST00000358901 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
VCP-201ENST00000358901 ABCC2Q92887 1545 aa15.51■□□□□ 0.07
VCP-201ENST00000358901 E7EWF7 191 aa15.51■□□□□ 0.07
VCP-201ENST00000358901 CTNNA2P26232 953 aa15.51■□□□□ 0.07
VCP-201ENST00000358901 SLC52A2Q9HAB3 445 aa15.51■□□□□ 0.07
VCP-201ENST00000358901 TUBB4BP68371 445 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 USP28Q96RU2 1077 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 EHMT1Q9H9B1 1298 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 NSFL1CQ9UNZ2 370 aaKnown RBP15.5■□□□□ 0.07
VCP-201ENST00000358901 GCC2Q8IWJ2 1684 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 CUTAO60888 179 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 GIGYF1O75420 1035 aaPredicted RBP15.5■□□□□ 0.07
VCP-201ENST00000358901 TBC1D8BQ0IIM8 1120 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 DDB1Q16531 1140 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 ZSWIM6Q9HCJ5 1215 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 ZAP70P43403 619 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 SMAP1Q8IYB5 467 aaPredicted RBP15.5■□□□□ 0.07
VCP-201ENST00000358901 NEK11Q8NG66 645 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 BCL2L12Q9HB09 334 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 OPA1O60313 960 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 GNA11P29992 359 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 MLKLQ8NB16 471 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 SELENOOQ9BVL4 669 aa15.5■□□□□ 0.07
VCP-201ENST00000358901 XPO4Q9C0E2 1151 aaKnown RBP15.5■□□□□ 0.07
VCP-201ENST00000358901 IBTKQ9P2D0 1353 aaPredicted RBP15.5■□□□□ 0.07
VCP-201ENST00000358901 NEURL1BA8MQ27 555 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 TUBBP07437 444 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 NLRP12P59046 1061 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 LETM2Q2VYF4 491 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 SSH2Q76I76 1423 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 MBD5Q9P267 1494 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 WDHD1O75717 1129 aaPredicted RBP15.49■□□□□ 0.07
VCP-201ENST00000358901 CCDC172P0C7W6 258 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 MYSM1Q5VVJ2 828 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 PPP4R3AQ6IN85 833 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 CCDC91Q7Z6B0 441 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 RRP36Q96EU6 259 aaKnown RBP15.49■□□□□ 0.07
VCP-201ENST00000358901 IMPACTQ9P2X3 320 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
VCP-201ENST00000358901 ARHGAP6O43182 974 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 VAV2P52735 878 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 SF3B2Q13435 895 aaKnown RBP15.48■□□□□ 0.07
VCP-201ENST00000358901 ADCK5Q3MIX3 580 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 BEND3Q5T5X7 828 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 INCENPQ9NQS7 918 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 CTNND2Q9UQB3 1225 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 ERVK-7P63135 1459 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 ZEB2O60315 1214 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 PIK3AP1Q6ZUJ8 805 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 IFT81Q8WYA0 676 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 KCNJ14Q9UNX9 436 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 PUM3Q15397 648 aaKnown RBP15.48■□□□□ 0.07
VCP-201ENST00000358901 SPECC1LQ69YQ0 1117 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 CCDC174Q6PII3 467 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 TBC1D5Q92609 795 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 STAMQ92783 540 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 PCDH11XQ9BZA7 1347 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 PCDH11YQ9BZA8 1340 aa15.48■□□□□ 0.07
VCP-201ENST00000358901 TPTE2Q6XPS3 522 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 TRMT44Q8IYL2 757 aaKnown RBP15.47■□□□□ 0.07
VCP-201ENST00000358901 KDM5CP41229 1560 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 EBAG9O00559 213 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 HDXQ7Z353 690 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 KIAA1468Q9P260 1216 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 STAP2Q9UGK3 403 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 TAF5LO75529 589 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 CHMP4BP1P59074 171 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 DSCC1Q9BVC3 393 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 RBM28Q9NW13 759 aaKnown RBP15.47■□□□□ 0.07
VCP-201ENST00000358901 hCG_1642624A0A1W2PR95 340 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 KRT9P35527 623 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 MTX1Q13505 466 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 ADALQ6DHV7 355 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 OSBPL3Q9H4L5 887 aa15.47■□□□□ 0.07
VCP-201ENST00000358901 WDR78Q5VTH9 848 aa15.46■□□□□ 0.07
VCP-201ENST00000358901 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.077e-8■■■□□ 16.9
VCP-201ENST00000358901 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
VCP-201ENST00000358901 ARHGEF10O15013 1369 aa15.46■□□□□ 0.07
VCP-201ENST00000358901 LDHBP07195 334 aaKnown RBP15.46■□□□□ 0.07
VCP-201ENST00000358901 CTDSPL2Q05D32 466 aa15.46■□□□□ 0.07
VCP-201ENST00000358901 CCDC155Q8N6L0 562 aa15.46■□□□□ 0.07
VCP-201ENST00000358901 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
VCP-201ENST00000358901 NOC4LQ9BVI4 516 aaKnown RBP15.46■□□□□ 0.07
VCP-201ENST00000358901 RGS12O14924 1447 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 ZNF532Q9HCE3 1301 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 POSTNQ15063 836 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 NBPF11Q86T75 865 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 NAPGQ99747 312 aaPredicted RBP15.45■□□□□ 0.06
VCP-201ENST00000358901 PLVAPQ9BX97 442 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 TRAF5O00463 557 aa15.45■□□□□ 0.06
VCP-201ENST00000358901 KRT13P13646 458 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms