RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 GPCPD1Q9NPB8 672 aa9.92□□□□□ -0.82
CTNND1-201ENST00000358694 I3L4J1 428 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 PRPF6O94906 941 aaKnown RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 FAM47CQ5HY64 1035 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 DCUN1D2Q6PH85 259 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 RNF169Q8NCN4 708 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 RBM17Q96I25 401 aaKnown RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 RTL1A6NKG5 1358 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 HCLS1P14317 486 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 ZYXQ15942 572 aaKnown RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 BSPRYQ5W0U4 402 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 MAEAQ7L5Y9 396 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 SPC25Q9HBM1 224 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 ARHGEF10LQ9HCE6 1279 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 SAP30BPQ9UHR5 308 aaKnown RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 CUX1P39880 1505 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 HPDP32754 393 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 LGSNQ5TDP6 509 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 GBP6Q6ZN66 633 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 TTC6Q86TZ1 520 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 PARD3BQ8TEW8 1205 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 SKA2Q8WVK7 121 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 HVCN1Q96D96 273 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 HFM1A2PYH4 1435 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 DDX39AO00148 427 aaKnown RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 DKC1O60832 514 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 ZSCAN22P10073 491 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 GBP1P32455 592 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 MCMDC2Q4G0Z9 681 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 TMTC4Q5T4D3 741 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 PPP4R4Q6NUP7 873 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 CHST3Q7LGC8 479 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 MAGEB6Q8N7X4 407 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 MED10Q9BTT4 135 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 AMOTL2Q9Y2J4 779 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 EMILIN1Q9Y6C2 1016 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 HGSO14964 777 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 CD19P15391 556 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 EIF6P56537 245 aaKnown RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 KIF22Q14807 665 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 HHATQ5VTY9 493 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 LMNTD2Q8IXW0 634 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 UBL4BQ8N7F7 174 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 ZNF526Q8TF50 670 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-201ENST00000358694 PIK3R4Q99570 1358 aa9.91□□□□□ -0.82
CTNND1-201ENST00000358694 ACTN4O43707 911 aaKnown RBP9.9□□□□□ -0.82
CTNND1-201ENST00000358694 CALUO43852 315 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-201ENST00000358694 SMIM24O75264 130 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 PPFIA2O75334 1257 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 ITKQ08881 620 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 SLFN5Q08AF3 891 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 LETM2Q2VYF4 491 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 FAM76AQ8TAV0 307 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 ZCRB1Q8TBF4 217 aaKnown RBP9.9□□□□□ -0.82
CTNND1-201ENST00000358694 DDB1Q16531 1140 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-201ENST00000358694 TCEANC2Q96MN5 208 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 FGD6Q6ZV73 1430 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 KRT3P12035 628 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-201ENST00000358694 LRRC43Q8N309 656 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 SEPT8Q92599 483 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 ANKRD2Q9GZV1 360 aa9.9□□□□□ -0.82
CTNND1-201ENST00000358694 UTP11Q9Y3A2 253 aaKnown RBP9.9□□□□□ -0.82
CTNND1-201ENST00000358694 ARHGEF35A5YM69 484 aa9.9□□□□□ -0.83
CTNND1-201ENST00000358694 SPDYE2BA6NHP3 402 aa9.9□□□□□ -0.83
CTNND1-201ENST00000358694 SPTLC2O15270 562 aa9.9□□□□□ -0.83
CTNND1-201ENST00000358694 ANXA1P04083 346 aa9.9□□□□□ -0.83
CTNND1-201ENST00000358694 SPDYE6P0CI01 402 aa9.9□□□□□ -0.83
CTNND1-201ENST00000358694 VWA3BQ502W6 1294 aa9.9□□□□□ -0.83
CTNND1-201ENST00000358694 DZIP3Q86Y13 1208 aaKnown RBP9.9□□□□□ -0.83
CTNND1-201ENST00000358694 HAUS8Q9BT25 410 aa9.9□□□□□ -0.83
CTNND1-201ENST00000358694 GIGYF1O75420 1035 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-201ENST00000358694 RNASE9P60153 205 aaKnown RBP9.89□□□□□ -0.83
CTNND1-201ENST00000358694 FAM193BQ96PV7 902 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-201ENST00000358694 NOC4LQ9BVI4 516 aaKnown RBP9.89□□□□□ -0.83
CTNND1-201ENST00000358694 DNAJC25Q9H1X3 360 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 VCX3AQ9NNX9 186 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 CCDC186Q7Z3E2 898 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.89□□□□□ -0.836e-14■□□□□ 9.9
CTNND1-201ENST00000358694 STK32BQ9NY57 414 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 FANCD2Q9BXW9 1451 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 WIZO95785 1651 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 ZBED4O75132 1171 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 KIF11P52732 1056 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 TTC31Q49AM3 519 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-201ENST00000358694 SMCR8Q8TEV9 937 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-201ENST00000358694 BAG5Q9UL15 447 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 CNPY2Q9Y2B0 182 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 POLA1P09884 1462 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-201ENST00000358694 GOLGA6CA6NDK9 693 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 GOLGA6BA6NDN3 693 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 GOLGA6DP0CG33 693 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 IFRD2Q12894 506 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-201ENST00000358694 BANK1Q8NDB2 785 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 PRIMPOLQ96LW4 560 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 GOLGA6AQ9NYA3 693 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 ASIC3Q9UHC3 531 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 ITM2BQ9Y287 266 aa9.89□□□□□ -0.83
CTNND1-201ENST00000358694 ARHGAP24Q8N264 748 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms