RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 MPHOSPH10O00566 681 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 PRPF40BQ6NWY9 871 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ARHGAP18Q8N392 663 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 MEIS3Q99687 375 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 RFX7Q2KHR2 1363 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ZNF569Q5MCW4 686 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 CCDC169A6NNP5 214 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 LMNAP02545 664 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 TTC5Q8N0Z6 440 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 LZTS2Q9BRK4 669 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 DNAJC25Q9H1X3 360 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 EPN1Q9Y6I3 576 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 FLOT1O75955 427 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 IARSP41252 1262 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 WWC2Q6AWC2 1192 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 CAPS2Q9BXY5 557 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 WDHD1O75717 1129 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 C6orf163Q5TEZ5 329 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 TAOK1Q7L7X3 1001 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 CARMIL3Q8ND23 1372 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 KIF4AO95239 1232 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 GUCY2CP25092 1073 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 NLRP5P59047 1200 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 TADA2BQ86TJ2 420 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 KCNB2Q92953 911 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 NOX5Q96PH1 765 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 NAP1L4Q99733 375 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 USP5P45974 858 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SEPT7Q16181 437 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 DDX46Q7L014 1031 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 KDM5AP29375 1690 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 KSR2Q6VAB6 950 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 GTF3C6Q969F1 213 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 ZNF830Q96NB3 372 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 EDEM3Q9BZQ6 932 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 UQCRFS1P1P0C7P4 283 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 MRPS25P82663 173 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SART1O43290 800 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 CRYMQ14894 314 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 CCDC152Q4G0S7 254 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 CARD6Q9BX69 1037 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SAMD15Q9P1V8 674 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 TADA3O75528 432 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 RPL13P26373 211 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SMTNP53814 917 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 CTTNBP2NLQ9P2B4 639 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 MINK1Q8N4C8 1332 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 PPP4R3AQ6IN85 833 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SH3GL3Q99963 347 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 MAP3K15Q6ZN16 1313 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 NR1I2O75469 434 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 CCDC42Q96M95 316 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 MAGI2Q86UL8 1455 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 MYO1CO00159 1063 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 IL15P40933 162 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 BICDL1Q6ZP65 573 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 MTRF1LQ9UGC7 380 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 ADGRL3Q9HAR2 1447 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 CEP170Q5SW79 1584 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 GFPT2O94808 682 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SLC8A3P57103 927 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 POSTNQ15063 836 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 NECTIN1Q15223 517 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 BANK1Q8NDB2 785 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 HAUS7Q99871 368 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 MIS12Q9H081 205 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SASH1O94885 1247 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 HLTFQ14527 1009 aaKnown RBP eCLIP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SETDB1Q15047 1291 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 RTN1Q16799 776 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 GKAP1Q5VSY0 366 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 ODF2LQ9ULJ1 636 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 ZBTB43O43298 467 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 GSPT1P15170 499 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 POLA2Q14181 598 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 TTC37Q6PGP7 1564 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 NUDT16Q96DE0 195 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 USP44Q9H0E7 712 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 VPS18Q9P253 973 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 DNAI2Q9GZS0 605 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 AOPEPQ8N6M6 819 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 MAGEC3Q8TD91 643 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 UBA7P41226 1012 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 KBTBD3Q8NAB2 608 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 CDK5RAP3Q96JB5 506 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 BCAP29Q9UHQ4 241 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 ANGEL1Q9UNK9 670 aaKnown RBP4.62□□□□□ -1.67
SYNE2-204ENST00000358025 ABCC10Q5T3U5 1492 aa4.62□□□□□ -1.67
SYNE2-204ENST00000358025 SBNO1A3KN83 1393 aa4.61□□□□□ -1.67
SYNE2-204ENST00000358025 FBXO41Q8TF61 875 aa4.61□□□□□ -1.67
SYNE2-204ENST00000358025 RAB17Q9H0T7 212 aa4.61□□□□□ -1.67
SYNE2-204ENST00000358025 UTP11Q9Y3A2 253 aaKnown RBP4.61□□□□□ -1.67
SYNE2-204ENST00000358025 CACNA2D3Q8IZS8 1091 aa4.61□□□□□ -1.67
SYNE2-204ENST00000358025 SPZ1Q9BXG8 430 aa4.61□□□□□ -1.67
SYNE2-204ENST00000358025 WDR78Q5VTH9 848 aa4.61□□□□□ -1.67
SYNE2-204ENST00000358025 CPLX4Q7Z7G2 160 aa4.61□□□□□ -1.67
SYNE2-204ENST00000358025 FBXW7Q969H0 707 aa4.61□□□□□ -1.67
SYNE2-204ENST00000358025 RRP15Q9Y3B9 282 aaKnown RBP4.61□□□□□ -1.67
SYNE2-204ENST00000358025 ARAP3Q8WWN8 1544 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms